Detailed information of g548.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3015418.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5ZJ54T-complex protein 1 subunit zeta OS=Gallus gallus OX=9031 GN=CCT6 PE=1 SV=3
O77622T-complex protein 1 subunit zeta OS=Oryctolagus cuniculus OX=9986 GN=CCT6 PE=1 SV=3
Q3MHL7T-complex protein 1 subunit zeta OS=Bos taurus OX=9913 GN=CCT6A PE=1 SV=3
Gene familySubfamily
Ubiquitin FamilyDUB|MINDY|MINDY

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF00118Cpn60_TCP1TCP-1/cpn60 chaperonin familyFamilyInterproscan
PF01593Amino_oxidaseFlavin containing amine oxidoreductaseDomainInterproscan
PF00125HistoneCore histone H2A/H2B/H3/H4DomainInterproscan
PF04424MINDY_DUBMINDY deubiquitinaseFamilyInterproscan
PF05916Sld5GINS complex proteinFamilyInterproscan
PF07810TMCTMC domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR027413Homologous_superfamilyGroEL-like equatorial domain superfamilyInterproscan
IPR002194Conserved_siteChaperonin TCP-1, conserved siteInterproscan
IPR012722FamilyT-complex protein 1, zeta subunitInterproscan
IPR027409Homologous_superfamilyGroEL-like apical domain superfamilyInterproscan
IPR027410Homologous_superfamilyTCP-1-like chaperonin intermediate domain superfamilyInterproscan
IPR002423FamilyChaperonin Cpn60/GroEL/TCP-1 familyInterproscan
IPR053374FamilyTCP-1 chaperonin-containing T-complexInterproscan
IPR017998FamilyChaperone tailless complex polypeptide 1 (TCP-1)Interproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR050281FamilyFlavin monoamine oxidase and related enzymesInterproscan
IPR002937DomainAmine oxidaseInterproscan
IPR000164FamilyHistone H3/CENP-AInterproscan
IPR007125DomainHistone H2A/H2B/H3Interproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR007518FamilyMINDY deubiquitinaseInterproscan
IPR033979DomainMINDY deubiquitinase domainInterproscan
IPR007257FamilyDNA replication complex GINS protein Psf2Interproscan
IPR021151DomainGINS subunit, domain AInterproscan
IPR036224Homologous_superfamilyGINS, helical bundle-like domain superfamilyInterproscan
IPR038900FamilyTransmembrane channel-like proteinInterproscan
IPR012496DomainTMC domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR11353CHAPERONINInterproscan
PTHR10742FLAVIN MONOAMINE OXIDASEInterproscan
PTHR11426HISTONE H3Interproscan
PTHR18063NF-E2 INDUCIBLE PROTEINInterproscan
PTHR12772DNA REPLICATION COMPLEX GINS PROTEIN PSF2Interproscan
PTHR16059ANTHRAX TOXIN RECEPTORInterproscan
PTHR23302TRANSMEMBRANE CHANNEL-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006457Biological Processprotein foldingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0051082Molecular Functionunfolded protein bindingInterproscan
GO:0140662Molecular FunctionATP-dependent protein folding chaperoneInterproscan
GO:0005832Cellular Componentchaperonin-containing T-complexInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0016807Molecular Functioncysteine-type carboxypeptidase activityInterproscan
GO:0071108Biological Processprotein K48-linked deubiquitinationInterproscan
GO:0071944Cellular Componentcell peripheryInterproscan
GO:1990380Molecular FunctionK48-linked deubiquitinase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0000727Biological Processdouble-strand break repair via break-induced replicationInterproscan
GO:0000811Cellular ComponentGINS complexInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0008381Molecular Functionmechanosensitive monoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13366MPAO, PAO1; polyamine oxidaseEC:1.5.3.14
EC:1.5.3.16
EC:1.5.3.-
Exosomeko04147deepkoala
Exosomeko04147deepkoala
Ubiquitin systemko04121deepkoala
Cilium and associated proteinsko03037deepkoala
DNA replication proteinsko03032deepkoala
beta-Alanine metabolismko00410deepkoala

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