Detailed information of g5489.t1 in Acropora digitifera

Genomic Location: chr3Alt:3903075...3916878
NR annotation: XP_029188518.2, tRNA dimethylallyltransferase-like [Acropora millepora]
Species abbreviation ADIGI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q80UN9tRNA dimethylallyltransferase OS=Mus musculus OX=10090 GN=Trit1 PE=1 SV=2
Q9H3H1tRNA dimethylallyltransferase OS=Homo sapiens OX=9606 GN=TRIT1 PE=1 SV=1
Q92547DNA topoisomerase 2-binding protein 1 OS=Homo sapiens OX=9606 GN=TOPBP1 PE=1 SV=3
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01715
all species →
IPPTIPP transferaseDomainInterproscan
PF00533
all species →
BRCTBRCA1 C Terminus (BRCT) domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001357
all species →
DomainBRCT domainInterproscan
IPR039657
all species →
FamilyDimethylallyltransferaseInterproscan
IPR036420
all species →
Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR049936
all species →
DomainDNA topoisomerase 2-binding protein 1, eighth BRCT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11088
all species →
TRNA DIMETHYLALLYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005739
all species →
Cellular ComponentmitochondrionInterproscan
GO:0006400
all species →
Biological ProcesstRNA modificationInterproscan
GO:0052381
all species →
Molecular FunctiontRNA dimethylallyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g5489.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP