Detailed information of g5493.t1 in Acropora digitifera

Genomic Location: chr3Alt:3952847...3959428
NR annotation: XP_044169248.1, syntaxin-18-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4VBI7Syntaxin-18 OS=Danio rerio OX=7955 GN=stx18 PE=2 SV=1
Q8VDS8Syntaxin-18 OS=Mus musculus OX=10090 GN=Stx18 PE=1 SV=2
Q9P2W9Syntaxin-18 OS=Homo sapiens OX=9606 GN=STX18 PE=1 SV=1
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10496
all species →		Syntaxin-18_NSNARE-complex protein Syntaxin-18 N-terminus DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010989
all species →		Homologous_superfamilySNAREInterproscan
IPR019529
all species →		DomainSNARE-complex protein Syntaxin-18, N-terminalInterproscan
IPR000727
all species →		DomainTarget SNARE coiled-coil homology domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15959
all species →		SYNTAXIN-18Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan
GO:0006890
all species →		Biological Processretrograde vesicle-mediated transport, Golgi to endoplasmic reticulumInterproscan
GO:0031201
all species →		Cellular ComponentSNARE complexInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K08492STX18; syntaxin 18-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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