Gene detail

Detailed information of g55.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: KAJ8314934.1, hypothetical protein KUTeg_007084 [Tegillarca granosa]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9NQZ6	Zinc finger C4H2 domain-containing protein OS=Homo sapiens OX=9606 GN=ZC4H2 PE=1 SV=1
Q68FG0	Zinc finger C4H2 domain-containing protein OS=Mus musculus OX=10090 GN=Zc4h2 PE=2 SV=1
Q7T3I0	Zinc finger C4H2 domain-containing protein OS=Danio rerio OX=7955 GN=zc4h2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000284 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0000296 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0001282 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0001500 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0003905 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0005354 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0006742 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0008166 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0014158 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0015209 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0016395 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13181 all species →	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF10146 all species →	zf-C4H2	Zinc finger-containing protein	Family	Interproscan
PF00583 all species →	Acetyltransf_1	Acetyltransferase (GNAT) family	Family	Interproscan
PF01391 all species →	Collagen	Collagen triple helix repeat (20 copies)	Repeat	Interproscan
PF02140 all species →	Gal_Lectin	Galactose binding lectin domain	Domain	Interproscan
PF17900 all species →	Peptidase_M1_N	Peptidase M1 N-terminal domain	Domain	Interproscan
PF06990 all species →	Gal-3-0_sulfotr	Galactose-3-O-sulfotransferase	Family	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF01762 all species →	Galactosyl_T	Galactosyltransferase	Family	Interproscan
PF17921 all species →	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00665 all species →	rve	Integrase core domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR028796 all species →	Family	Tetratricopeptide repeat protein 8	Interproscan
IPR044069 all species →	Domain	Zinc finger C4H2-type	Interproscan
IPR018482 all species →	Family	Zinc finger C4H2 domain-containing protein	Interproscan
IPR045047 all species →	Family	N-acetyltransferase Ard1-like	Interproscan
IPR000182 all species →	Domain	GNAT domain	Interproscan
IPR016181 all species →	Homologous_superfamily	Acyl-CoA N-acyltransferase	Interproscan
IPR008160 all species →	Repeat	Collagen triple helix repeat	Interproscan
IPR000922 all species →	Domain	D-galactoside/L-rhamnose binding SUEL lectin domain	Interproscan
IPR043159 all species →	Homologous_superfamily	D-galactoside/L-rhamnose binding SUEL lectin domain superfamily	Interproscan
IPR045357 all species →	Domain	Aminopeptidase N-like , N-terminal domain	Interproscan
IPR050344 all species →	Family	Peptidase M1 family aminopeptidases	Interproscan
IPR042097 all species →	Homologous_superfamily	Aminopeptidase N-like , N-terminal domain superfamliy	Interproscan
IPR009729 all species →	Family	Galactose-3-O-sulfotransferase	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR002659 all species →	Family	Glycosyl transferase, family 31	Interproscan
IPR041588 all species →	Domain	Integrase zinc-binding domain	Interproscan
IPR001584 all species →	Domain	Integrase, catalytic core	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR050951 all species →	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR031152 all species →	Family	Plexin domain-containing protein	Interproscan
IPR038901 all species →	Family	Hexosaminidase D-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44177 all species →	TETRATRICOPEPTIDE REPEAT PROTEIN 8	Interproscan
PTHR31058 all species →	ZINC FINGER C4H2 DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR23091 all species →	N-TERMINAL ACETYLTRANSFERASE	Interproscan
PTHR46780 all species →	PROTEIN EVA-1	Interproscan
PTHR11533 all species →	PROTEASE M1 ZINC METALLOPROTEASE	Interproscan
PTHR14647 all species →	GALACTOSE-3-O-SULFOTRANSFERASE	Interproscan
PTHR19446 all species →	REVERSE TRANSCRIPTASES	Interproscan
PTHR11214 all species →	BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE	Interproscan
PTHR37984 all species →	PROTEIN CBG26694	Interproscan
PTHR13055 all species →	TUMOR ENDOTHELIAL MARKER 7 RELATED	Interproscan
PTHR21040 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0034464 all species →	Cellular Component	BBSome	Interproscan
GO:0036064 all species →	Cellular Component	ciliary basal body	Interproscan
GO:0097730 all species →	Cellular Component	non-motile cilium	Interproscan
GO:1905515 all species →	Biological Process	non-motile cilium assembly	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0045666 all species →	Biological Process	positive regulation of neuron differentiation	Interproscan
GO:0004596 all species →	Molecular Function	peptide alpha-N-acetyltransferase activity	Interproscan
GO:0006474 all species →	Biological Process	N-terminal protein amino acid acetylation	Interproscan
GO:0031415 all species →	Cellular Component	NatA complex	Interproscan
GO:1990189 all species →	Molecular Function	peptide-serine-alpha-N-acetyltransferase activity	Interproscan
GO:1990190 all species →	Molecular Function	peptide-glutamate-alpha-N-acetyltransferase activity	Interproscan
GO:0016747 all species →	Molecular Function	acyltransferase activity, transferring groups other than amino-acyl groups	Interproscan
GO:0030246 all species →	Molecular Function	carbohydrate binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0042277 all species →	Molecular Function	peptide binding	Interproscan
GO:0043171 all species →	Biological Process	peptide catabolic process	Interproscan
GO:0070006 all species →	Molecular Function	metalloaminopeptidase activity	Interproscan
GO:0001733 all species →	Molecular Function	galactosylceramide sulfotransferase activity	Interproscan
GO:0009247 all species →	Biological Process	glycolipid biosynthetic process	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0008146 all species →	Molecular Function	sulfotransferase activity	Interproscan
GO:0006486 all species →	Biological Process	protein glycosylation	Interproscan
GO:0016758 all species →	Molecular Function	hexosyltransferase activity	Interproscan
GO:0000139 all species →	Cellular Component	Golgi membrane	Interproscan
GO:0006024 all species →	Biological Process	glycosaminoglycan biosynthetic process	Interproscan
GO:0035250 all species →	Molecular Function	UDP-galactosyltransferase activity	Interproscan
GO:0015074 all species →	Biological Process	DNA integration	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0015929 all species →	Molecular Function	hexosaminidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01019	GAL3ST1; galactosylceramide sulfotransferase	EC:2.8.2.11	Glycosyltransferases	ko01003	deepkoala
K01047	PLA2G, SPLA2; secretory phospholipase A2	EC:3.1.1.4	Chromosome and associated proteins	ko03036	deepkoala
K01593	DDC, TDC; aromatic-L-amino-acid/L-tryptophan decarboxylase	EC:4.1.1.28 EC:4.1.1.105	Exosome	ko04147	deepkoala
K16781	TTC8, BBS8; tetratricopeptide repeat protein 8	-	Cilium and associated proteins	ko03037	deepkoala
K20791	NAA10_11, ARD1_2; N-alpha-acetyltransferase 10/11	EC:2.3.1.255	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.