Detailed information of g5516.t1.1 in Haliclystus octoradiatus

Genomic Location: :...
NR annotation: XP_039258866.1, uncharacterized protein LOC120335429, partial [Styela clava]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
Q1LW01Hatching enzyme 1.2 OS=Danio rerio OX=7955 GN=he1.2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF01400AstacinAstacin (Peptidase family M12A)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001506DomainPeptidase M12AInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000998DomainMAM domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan
IPR034035DomainAstacin-like metallopeptidase domainInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906PROPERDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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