Gene detail

Detailed information of g5549.t1.1 in Haliclystus octoradiatus

Genomic Location: :...
NR annotation: XP_033106420.1, ribonuclease H1-like [Anneissia japonica]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q0AV47	Ribonuclease H OS=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) OX=335541 GN=rnhA PE=3 SV=1
Q04740	Ribonuclease H OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RNH1 PE=1 SV=2
Q07762	Ribonuclease H OS=Crithidia fasciculata OX=5656 GN=RNH1 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01693	Cauli_VI	Caulimovirus viroplasmin	Family	Interproscan
PF00075	RNase_H	RNase H	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002156	Domain	Ribonuclease H domain	Interproscan
IPR037056	Homologous_superfamily	Ribonuclease H1, N-terminal domain superfamily	Interproscan
IPR011320	Domain	Ribonuclease H1, N-terminal	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR050092	Family	Ribonuclease H	Interproscan
IPR009027	Homologous_superfamily	Large ribosomal subunit protein bL9/RNase H1, N-terminal	Interproscan
IPR017067	Family	Ribonuclease H1, eukaryote	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10642	RIBONUCLEASE H1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004523	Molecular Function	RNA-DNA hybrid ribonuclease activity	Interproscan
GO:0043137	Biological Process	DNA replication, removal of RNA primer	Interproscan
GO:0090502	Biological Process	obsolete RNA phosphodiester bond hydrolysis, endonucleolytic	Interproscan
GO:0000287	Molecular Function	magnesium ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03469	rnhA, RNASEH1; ribonuclease HI	EC:3.1.26.4	DNA replication proteins	ko03032	deepkoala