Detailed information of g555.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KAI8496686.1, hypothetical protein Bbelb_253410 [Branchiostoma belcheri]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q0EEE2Patched domain-containing protein 3 OS=Mus musculus OX=10090 GN=Ptchd3 PE=1 SV=1
M0R3Q7Patched domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ptchd3 PE=1 SV=1
Q3KNS1Patched domain-containing protein 3 OS=Homo sapiens OX=9606 GN=PTCHD3 PE=1 SV=4
Gene familySubfamily
Transcription Factors Familyzf-CCCH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14500MMS19_NDos2-interacting transcription regulator of RNA-Pol-IIDomainInterproscan
PF12460MMS19_CRNAPII transcription regulator C-terminalRepeatInterproscan
PF01151ELOGNS1/SUR4 familyFamilyInterproscan
PF01490Aa_transTransmembrane amino acid transporter proteinFamilyInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00095WAPWAP-type (Whey Acidic Protein) 'four-disulfide core'DomainInterproscan
PF00821PEPCK_GTPPhosphoenolpyruvate carboxykinase C-terminal P-loop domainDomainInterproscan
PF17297PEPCK_NPhosphoenolpyruvate carboxykinase N-terminal domainDomainInterproscan
PF18345zf_CCCH_4Zinc finger domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00305LipoxygenaseLipoxygenaseDomainInterproscan
PF11027DUF2615Protein of unknown function (DUF2615)FamilyInterproscan
PF02460PatchedPatched familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR029240DomainMMS19, N-terminalInterproscan
IPR039920FamilyDNA repair/transcription protein MET18/MMS19Interproscan
IPR024687DomainMMS19, C-terminalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR002076FamilyELO familyInterproscan
IPR013057DomainAmino acid transporter, transmembrane domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR000629Conserved_siteATP-dependent RNA helicase DEAD-box, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR050079FamilyDEAD box RNA helicaseInterproscan
IPR008197DomainWAP-type 'four-disulfide core' domainInterproscan
IPR013035Homologous_superfamilyPhosphoenolpyruvate carboxykinase, C-terminalInterproscan
IPR008209FamilyPhosphoenolpyruvate carboxykinase, GTP-utilisingInterproscan
IPR035077DomainPhosphoenolpyruvate carboxykinase, C-terminal P-loop domainInterproscan
IPR035078DomainPhosphoenolpyruvate carboxykinase, GTP-utilising, N-terminalInterproscan
IPR008210Homologous_superfamilyPhosphoenolpyruvate carboxykinase, N-terminalInterproscan
IPR018091Conserved_sitePhosphoenolpyruvate carboxykinase, GTP-utilising, conserved siteInterproscan
IPR039842FamilyTBC1 domain family member 7Interproscan
IPR035969Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan
IPR043039Homologous_superfamilyTBC1 domain family member 7, domain 2Interproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR045348FamilyCPSF complex subunit CPSF4-likeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR013819DomainLipoxygenase, C-terminalInterproscan
IPR036226Homologous_superfamilyLipoxigenase, C-terminal domain superfamilyInterproscan
IPR000907FamilyLipoxygenaseInterproscan
IPR020309FamilyUncharacterised protein family, CD034/YQF4Interproscan
IPR051697FamilyPatched domain-containing proteinInterproscan
IPR003392FamilyProtein patched/dispatchedInterproscan
IPR000731DomainSterol-sensing domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12891DNA REPAIR/TRANSCRIPTION PROTEIN MET18/MMS19Interproscan
PTHR11157FATTY ACID ACYL TRANSFERASE-RELATEDInterproscan
PTHR48017OS05G0424000 PROTEIN-RELATEDInterproscan
PTHR47959ATP-DEPENDENT RNA HELICASE RHLE-RELATEDInterproscan
PTHR11561PHOSPHOENOLPYRUVATE CARBOXYKINASEInterproscan
PTHR13530TBC1 DOMAIN FAMILY MEMBER 7Interproscan
PTHR23102CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 4-RELATEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR11771LIPOXYGENASEInterproscan
PTHR31019UNCHARACTERIZEDInterproscan
PTHR10796PATCHED-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016226Biological Processiron-sulfur cluster assemblyInterproscan
GO:0097361Cellular Componentcytosolic [4Fe-4S] assembly targeting complexInterproscan
GO:0097428Biological Processprotein maturation by iron-sulfur cluster transferInterproscan
GO:0009922Molecular Functionfatty acid elongase activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0019367Biological Processfatty acid elongation, saturated fatty acidInterproscan
GO:0030148Biological Processsphingolipid biosynthetic processInterproscan
GO:0030176Cellular Componentobsolete integral component of endoplasmic reticulum membraneInterproscan
GO:0034625Biological Processfatty acid elongation, monounsaturated fatty acidInterproscan
GO:0034626Biological Processfatty acid elongation, polyunsaturated fatty acidInterproscan
GO:0042761Biological Processvery long-chain fatty acid biosynthetic processInterproscan
GO:0003333Biological Processamino acid transmembrane transportInterproscan
GO:0015171Molecular Functionamino acid transmembrane transporter activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0030414Molecular Functionpeptidase inhibitor activityInterproscan
GO:0004611Molecular Functionphosphoenolpyruvate carboxykinase activityInterproscan
GO:0006094Biological ProcessgluconeogenesisInterproscan
GO:0017076Molecular Functionpurine nucleotide bindingInterproscan
GO:0004613Molecular Functionphosphoenolpyruvate carboxykinase (GTP) activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0019543Biological Processpropionate catabolic processInterproscan
GO:0030145Molecular Functionmanganese ion bindingInterproscan
GO:0033993Biological Processresponse to lipidInterproscan
GO:0042594Biological Processresponse to starvationInterproscan
GO:0046327Biological Processglycerol biosynthetic process from pyruvateInterproscan
GO:0071333Biological Processcellular response to glucose stimulusInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0032007Biological Processnegative regulation of TOR signalingInterproscan
GO:0090630Biological Processactivation of GTPase activityInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0098789Biological Processobsolete pre-mRNA cleavage required for polyadenylationInterproscan
GO:0016702Molecular Functionoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygenInterproscan
GO:0034440Biological Processlipid oxidationInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14778DDX49, DBP8; ATP-dependent RNA helicase DDX49/DBP8EC:5.6.2.7
Bacterial motility proteinsko02035deepkoala
DNA repair and recombination proteinsko03400deepkoala
Insulin resistanceko04931deepkoala
Ribosome biogenesisko03009deepkoala

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