Genomic Location: Sc0000111:437093...441378
NR annotation: XP_015758261.1, PREDICTED: tyrosyl-DNA phosphodiesterase 1-like isoform X2 [Acropora digitifera]
Species Montipora capitata · all data for this species · gene families
| CDS |
| g5563.t1 |
| Transcript |
| g5563.t1 |
| Protein |
| g5563.t1 |
| UniProt accession | Description |
|---|---|
| Q4G056 | Tyrosyl-DNA phosphodiesterase 1 OS=Rattus norvegicus OX=10116 GN=Tdp1 PE=1 SV=1 |
| Q8BJ37 | Tyrosyl-DNA phosphodiesterase 1 OS=Mus musculus OX=10090 GN=Tdp1 PE=1 SV=2 |
| Q9NUW8 | Tyrosyl-DNA phosphodiesterase 1 OS=Homo sapiens OX=9606 GN=TDP1 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003551 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF06087 all species → | Tyr-DNA_phospho | Tyrosyl-DNA phosphodiesterase | Family | Interproscan |
| PF10283 all species → | zf-CCHH | PBZ domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR010347 all species → | Family | Tyrosyl-DNA phosphodiesterase I | Interproscan |
| IPR019406 all species → | Domain | Aprataxin and PNK-like factor, PBZ domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12415 all species → | TYROSYL-DNA PHOSPHODIESTERASE 1 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006281 all species → | Biological Process | DNA repair | Interproscan |
| GO:0008081 all species → | Molecular Function | phosphoric diester hydrolase activity | Interproscan |
| GO:0003690 all species → | Molecular Function | double-stranded DNA binding | Interproscan |
| GO:0003697 all species → | Molecular Function | single-stranded DNA binding | Interproscan |
| GO:0017005 all species → | Molecular Function | 3'-tyrosyl-DNA phosphodiesterase activity | Interproscan |
g5563.t1.
