Detailed information of g557.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3182280.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9Y2P8RNA 3'-terminal phosphate cyclase-like protein OS=Homo sapiens OX=9606 GN=RCL1 PE=1 SV=3
Q9JJT0RNA 3'-terminal phosphate cyclase-like protein OS=Mus musculus OX=10090 GN=Rcl1 PE=2 SV=1
Q2KHX8RNA 3'-terminal phosphate cyclase-like protein OS=Bos taurus OX=9913 GN=RCL1 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01476LysMLysM domainDomainInterproscan
PF01201Ribosomal_S8eRibosomal protein S8eFamilyInterproscan
PF16880EHD_NN-terminal EH-domain containing proteinFamilyInterproscan
PF00350Dynamin_NDynamin familyDomainInterproscan
PF07714PK_Tyr_Ser-ThrProtein tyrosine and serine/threonine kinaseDomainInterproscan
PF01137RTCRNA 3'-terminal phosphate cyclaseDomainInterproscan
PF05189RTC_insertRNA 3'-terminal phosphate cyclase (RTC), insert domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00589Phage_integrasePhage integrase familyFamilyInterproscan
PF01825GPSGPCR proteolysis site, GPS, motif MotifInterproscan
PF02793HRMHormone receptor domainFamilyInterproscan
PF16489GAINGPCR-Autoproteolysis INducing (GAIN) domainDomainInterproscan
PF000027tm_27 transmembrane receptor (Secretin family)FamilyInterproscan
PF00008EGFEGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036779Homologous_superfamilyLysM domain superfamilyInterproscan
IPR018392DomainLysM domainInterproscan
IPR022309FamilyRibosomal protein eS8/ribosomal biogenesis NSA2Interproscan
IPR031692DomainEH domain-containing protein, N-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR030381DomainDynamin-type guanine nucleotide-binding (G) domainInterproscan
IPR045063DomainDynamin, N-terminalInterproscan
IPR013956FamilyE3 ubiquitin ligase Bre1Interproscan
IPR000719DomainProtein kinase domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR017421FamilyMitogen-activated protein (MAP) kinase kinase kinase 7-likeInterproscan
IPR001245DomainSerine-threonine/tyrosine-protein kinase, catalytic domainInterproscan
IPR017441Binding_siteProtein kinase, ATP binding siteInterproscan
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR037136Homologous_superfamilyRNA 3'-terminal phosphate cyclase domain superfamilyInterproscan
IPR023797DomainRNA 3'-terminal phosphate cyclase domainInterproscan
IPR016443FamilyRNA 3'-terminal phosphate cyclase type 2Interproscan
IPR020719Conserved_siteRNA 3'-terminal phosphate cyclase-like, conserved siteInterproscan
IPR013791DomainRNA 3'-terminal phosphate cyclase, insert domainInterproscan
IPR013792Homologous_superfamilyRNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/betaInterproscan
IPR036553Homologous_superfamilyRNA 3'-terminal phosphate cyclase, insert domain superfamilyInterproscan
IPR000228FamilyRNA 3'-terminal phosphate cyclaseInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR052489FamilyLeucine-rich repeat and WD repeat-containing protein 1Interproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR013762Homologous_superfamilyIntegrase-like, catalytic domain superfamilyInterproscan
IPR011010Homologous_superfamilyDNA breaking-rejoining enzyme, catalytic coreInterproscan
IPR002104DomainIntegrase, catalytic domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR017981DomainGPCR, family 2-like, 7TMInterproscan
IPR001879DomainGPCR, family 2, extracellular hormone receptor domainInterproscan
IPR000832FamilyGPCR, family 2, secretin-likeInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR036445Homologous_superfamilyGPCR family 2, extracellular hormone receptor domain superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan
IPR032471DomainGAIN domain, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11216EH DOMAINInterproscan
PTHR23163RING FINGER PROTEIN-RELATEDInterproscan
PTHR46716MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7Interproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR11096RNA 3' TERMINAL PHOSPHATE CYCLASEInterproscan
PTHR24370OPTICINInterproscan
PTHR35617PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR12011ADHESION G-PROTEIN COUPLED RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006897Biological ProcessendocytosisInterproscan
GO:0016197Biological Processendosomal transportInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0033503Cellular ComponentHULC complexInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0071894Biological Processobsolete histone H2B conserved C-terminal lysine ubiquitinationInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0000287Molecular Functionmagnesium ion bindingInterproscan
GO:0004709Molecular FunctionMAP kinase kinase kinase activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0042254Biological Processribosome biogenesisInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0000479Biological Processendonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0004521Molecular FunctionRNA endonuclease activityInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0007166Biological Processcell surface receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007189Biological Processadenylate cyclase-activating G protein-coupled receptor signaling pathwayInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04427MAP3K7, TAK1; mitogen-activated protein kinase kinase kinase 7EC:2.7.11.25
Ribosome biogenesisko03009deepkoala
Domain-containing proteins not elsewhere classifiedko04990deepkoala
Protein kinasesko01001deepkoala

TOP