Gene detail

Detailed information of g5589.t1 in Tripedalia maipoensis

Genomic Location: scaffold_2:33568298...33600009
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11221 all species →	Med21	Subunit 21 of Mediator complex	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021384 all species →	Family	Mediator complex, subunit Med21	Interproscan
IPR037212 all species →	Homologous_superfamily	Mediator complex, subunit Med7/Med21-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13381 all species →	RNA POLYMERASE II HOLOENZYME COMPONENT SRB7	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003712 all species →	Molecular Function	transcription coregulator activity	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0016592 all species →	Cellular Component	mediator complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15152	MED21, SRB7; mediator of RNA polymerase II transcription subunit 21	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.