Detailed information of g560.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_002159994.1, thyrotroph embryonic factor [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5FW38Nuclear factor interleukin-3-regulated protein OS=Xenopus tropicalis OX=8364 GN=nfil3 PE=2 SV=1
P972885-hydroxytryptamine receptor 4 OS=Mus musculus OX=10090 GN=Htr4 PE=1 SV=3
O705285-hydroxytryptamine receptor 4 OS=Cavia porcellus OX=10141 GN=HTR4 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyTF_bZIP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF06733DEAD_2DEAD_2FamilyInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF07716bZIP_2Basic region leucine zipperCoiled-coilInterproscan
PF09588YqaJYqaJ-like viral recombinase domainDomainInterproscan
PF00112Peptidase_C1Papain family cysteine proteaseDomainInterproscan
PF08246Inhibitor_I29Cathepsin propeptide inhibitor domain (I29)DomainInterproscan
PF01549ShKShK domain-likeDomainInterproscan
PF00089TrypsinTrypsinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR045028FamilyHelicase superfamily 1/2, DinG/Rad3-likeInterproscan
IPR006554DomainHelicase-like, DEXD box c2 typeInterproscan
IPR014013DomainHelicase superfamily 1/2, ATP-binding domain, DinG/Rad3-typeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR010614DomainRAD3-like helicase, DEADInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR004827DomainBasic-leucine zipper domainInterproscan
IPR046347Homologous_superfamilyBasic-leucine zipper domain superfamilyInterproscan
IPR040223FamilyPAR basic leucine zipper proteinInterproscan
IPR019080DomainYqaJ viral recombinaseInterproscan
IPR011604Homologous_superfamilyPD-(D/E)XK endonuclease-like domain superfamilyInterproscan
IPR011335Homologous_superfamilyRestriction endonuclease type II-likeInterproscan
IPR000668DomainPeptidase C1A, papain C-terminalInterproscan
IPR000169Active_siteCysteine peptidase, cysteine active siteInterproscan
IPR039417DomainPapain-like cysteine endopeptidaseInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR013201DomainCathepsin propeptide inhibitor domain (I29)Interproscan
IPR025660Active_siteCysteine peptidase, histidine active siteInterproscan
IPR025661Active_siteCysteine peptidase, asparagine active siteInterproscan
IPR013128FamilyPeptidase C1AInterproscan
IPR043504Homologous_superfamilyPeptidase S1, PA clan, chymotrypsin-like foldInterproscan
IPR033116Active_siteSerine proteases, trypsin family, serine active siteInterproscan
IPR003582DomainShKT domainInterproscan
IPR001254DomainSerine proteases, trypsin domainInterproscan
IPR018114Active_siteSerine proteases, trypsin family, histidine active siteInterproscan
IPR009003Homologous_superfamilyPeptidase S1, PA clanInterproscan
IPR001314FamilyPeptidase S1A, chymotrypsin familyInterproscan
IPR050127FamilySerine Proteases (Peptidase S1 Family)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24246OLFACTORY RECEPTOR AND ADENOSINE RECEPTORInterproscan
PTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR11988THYROTROPH EMBRYONIC FACTOR RELATEDInterproscan
PTHR39953RE54151PInterproscan
PTHR12411CYSTEINE PROTEASE FAMILY C1-RELATEDInterproscan
PTHR24264TRYPSIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan
GO:0034085Biological Processestablishment of sister chromatid cohesionInterproscan
GO:0016818Molecular Functionhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan
GO:0004197Molecular Functioncysteine-type endopeptidase activityInterproscan
GO:0005764Cellular ComponentlysosomeInterproscan
GO:0051603Biological Processproteolysis involved in protein catabolic processInterproscan
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan

TOP