Detailed information of g565.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_015763991.1, PREDICTED: coiled-coil domain-containing protein 174-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6PII3Coiled-coil domain-containing protein 174 OS=Homo sapiens OX=9606 GN=CCDC174 PE=1 SV=3
Q5ZIH9Coiled-coil domain-containing protein 174 OS=Gallus gallus OX=9031 GN=CCDC174 PE=2 SV=1
Q5PQS7Coiled-coil domain-containing protein 174 OS=Rattus norvegicus OX=10116 GN=Ccdc174 PE=2 SV=2
Gene familySubfamily
Transcription Factors FamilyARID

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12624Chorein_NVPS13-like, N-terminalDomainInterproscan
PF12031BAF250_CSWI/SNF-like complex subunit BAF250/Osa RepeatInterproscan
PF01388ARIDARID/BRIGHT DNA binding domainDomainInterproscan
PF00083Sugar_trSugar (and other) transporterFamilyInterproscan
PF14724mit_SMPDaseMitochondrial-associated sphingomyelin phosphodiesteraseFamilyInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF01878EVEEVE domainDomainInterproscan
PF00575S1S1 RNA binding domainDomainInterproscan
PF13300DUF4078Domain of unknown function (DUF4078)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026728FamilyBridge-like lipid transfer protein family member 3A/BInterproscan
IPR026854DomainVacuolar protein sorting-associated protein 13-like, N-terminal domainInterproscan
IPR036431Homologous_superfamilyARID DNA-binding domain superfamilyInterproscan
IPR033388DomainSWI/SNF-like complex subunit BAF250, C-terminalInterproscan
IPR021906FamilySWI/SNF-like complex subunit BAF250/OsaInterproscan
IPR001606DomainARID DNA-binding domainInterproscan
IPR005828FamilyMajor facilitator, sugar transporter-likeInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR005829Conserved_siteSugar transporter, conserved siteInterproscan
IPR020846DomainMajor facilitator superfamily domainInterproscan
IPR024129FamilySphingomyelin phosphodiesterase 4Interproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR033551FamilyDynein regulatory complex subunit 7Interproscan
IPR047197DomainThymocyte nuclear protein 1-like, EVE domainInterproscan
IPR002740DomainEVE domainInterproscan
IPR052181Family5-Hydroxymethylcytosine bindingInterproscan
IPR015947Homologous_superfamilyPUA-like superfamilyInterproscan
IPR003029DomainS1 domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR000110FamilySmall ribosomal subunit protein bS1Interproscan
IPR035104FamilyRibosomal protein S1-likeInterproscan
IPR050437FamilyBacterial ribosomal protein bS1Interproscan
IPR025066FamilyCoiled-coil domain-containing protein 174-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22774UNCHARACTERIZEDInterproscan
PTHR12656BRG-1 ASSOCIATED FACTOR 250 BAF250Interproscan
PTHR24064SOLUTE CARRIER FAMILY 22 MEMBERInterproscan
PTHR12988SPHINGOMYELIN PHOSPHODIESTERASE 4Interproscan
PTHR33395TRANSCRIPTASE, PUTATIVE-RELATED-RELATEDInterproscan
PTHR35249DYNEIN REGULATORY COMPLEX SUBUNIT 7Interproscan
PTHR14087THYMOCYTE NUCLEAR PROTEIN 1Interproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR1072430S RIBOSOMAL PROTEIN S1Interproscan
PTHR15885UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016514Cellular ComponentSWI/SNF complexInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan
GO:0035060Cellular Componentbrahma complexInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0071565Cellular ComponentnBAF complexInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0050290Molecular Functionsphingomyelin phosphodiesterase D activityInterproscan
GO:0006685Biological Processsphingomyelin catabolic processInterproscan
GO:0046475Biological Processglycerophospholipid catabolic processInterproscan
GO:0046513Biological Processceramide biosynthetic processInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0007508Biological Processlarval heart developmentInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0061343Biological Processcell adhesion involved in heart morphogenesisInterproscan
GO:0031514Cellular Componentmotile ciliumInterproscan
GO:0048870Biological Processcell motilityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02945RP-S1, rpsA; small subunit ribosomal protein S1-Spliceosomeko03041deepkoala
Chromosome and associated proteinsko03036deepkoala
Sphingolipid metabolismko00600deepkoala
Ribosomeko03011deepkoala

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