Detailed information of g5655.t1 in Montipora capitata

Genomic Location: Sc0000114:294282...323743
NR annotation: XP_029191030.2, LOW QUALITY PROTEIN: RING finger protein 17-like [Acropora millepora]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9BXT8RING finger protein 17 OS=Homo sapiens OX=9606 GN=RNF17 PE=1 SV=3
Q4R3G4RING finger protein 17 OS=Macaca fascicularis OX=9541 GN=RNF17 PE=2 SV=2
Q99MV7RING finger protein 17 OS=Mus musculus OX=10090 GN=Rnf17 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003362 (this species only)
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00097
all species →		zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF00567
all species →		TUDORTudor domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002999
all species →		DomainTudor domainInterproscan
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR039117
all species →		FamilyRING finger protein 17Interproscan
IPR000315
all species →		DomainB-box-type zinc fingerInterproscan
IPR018957
all species →		DomainZinc finger, C3HC4 RING-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907
all species →		Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR035437
all species →		Homologous_superfamilySNase-like, OB-fold superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16442
all species →		RING FINGER PROTEIN 17Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g5655.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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