Detailed information of g567.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_012558059.2, brefeldin A-inhibited guanine nucleotide-exchange protein 3 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5TH69Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Homo sapiens OX=9606 GN=ARFGEF3 PE=1 SV=3
Q3UGY8Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Mus musculus OX=10090 GN=Arfgef3 PE=1 SV=1
P50430Arylsulfatase B OS=Rattus norvegicus OX=10116 GN=Arsb PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01612DNA_pol_A_exo13'-5' exonucleaseDomainInterproscan
PF00476DNA_pol_ADNA polymerase family AFamilyInterproscan
PF013675_3_exonuc5'-3' exonuclease, C-terminal SAM foldDomainInterproscan
PF027395_3_exonuc_N5'-3' exonuclease, N-terminal resolvase-like domainDomainInterproscan
PF07719TPR_2Tetratricopeptide repeatRepeatInterproscan
PF00014Kunitz_BPTIKunitz/Bovine pancreatic trypsin inhibitor domainDomainInterproscan
PF06588Muskelin_NMuskelin N-terminusFamilyInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF01327Pep_deformylasePolypeptide deformylaseDomainInterproscan
PF16213DCBMon2/Sec7/BIG1-like, dimerisation and cyclophilin-binding domainDomainInterproscan
PF20252BIG2_CBIG2 C-terminal domainDomainInterproscan
PF09324Sec7-like_HDSMon2/Sec7/BIG1-like, HDSDomainInterproscan
PF00884SulfataseSulfataseFamilyInterproscan
PF01008IF-2BInitiation factor 2 subunit familyFamilyInterproscan
PF16367RRM_7RNA recognition motifDomainInterproscan
PF16366CEBP_ZZCytoplasmic polyadenylation element-binding protein ZZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR002562Domain3'-5' exonuclease domainInterproscan
IPR020045DomainDNA polymerase I-like, H3TH domainInterproscan
IPR036279Homologous_superfamily5'-3' exonuclease, C-terminal domain superfamilyInterproscan
IPR001098DomainDNA-directed DNA polymerase, family A, palm domainInterproscan
IPR002298FamilyDNA polymerase AInterproscan
IPR019760Conserved_siteDNA-directed DNA polymerase, family A, conserved siteInterproscan
IPR029060Homologous_superfamilyPIN-like domain superfamilyInterproscan
IPR020046Domain5'-3' exonuclease, alpha-helical arch, N-terminalInterproscan
IPR002421Domain5'-3' exonucleaseInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR008918Conserved_siteHelix-hairpin-helix motif, class 2Interproscan
IPR018320FamilyDNA polymerase 1Interproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR052004FamilyAxonemal Dynein Assembly Factor 4Interproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR008978Homologous_superfamilyHSP20-like chaperoneInterproscan
IPR013105RepeatTetratricopeptide repeat 2Interproscan
IPR002223DomainPancreatic trypsin inhibitor Kunitz domainInterproscan
IPR036880Homologous_superfamilyPancreatic trypsin inhibitor Kunitz domain superfamilyInterproscan
IPR020901Conserved_siteProteinase inhibitor I2, Kunitz, conserved siteInterproscan
IPR050098FamilyKunitz-type Serine Protease InhibitorInterproscan
IPR010565DomainMuskelin, N-terminalInterproscan
IPR052456FamilyCTLH complex component proteinInterproscan
IPR050449FamilyEphrin receptor tyrosine kinasesInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR023635FamilyPeptide deformylaseInterproscan
IPR036821Homologous_superfamilyPeptide deformylase superfamilyInterproscan
IPR032629DomainMon2/Sec7/BIG1-like, dimerisation and cyclophilin-binding domainInterproscan
IPR046455DomainSec7/BIG1-like, C-terminal domainInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR015403DomainMon2/Sec7/BIG1-like, HDSInterproscan
IPR027649FamilyInverted formin-2Interproscan
IPR017850Homologous_superfamilyAlkaline-phosphatase-like, core domain superfamilyInterproscan
IPR047115FamilyArylsulfatase BInterproscan
IPR000917DomainSulfatase, N-terminalInterproscan
IPR024607Conserved_siteSulfatase, conserved siteInterproscan
IPR042529Homologous_superfamilyInitiation factor 2B-like, C-terminalInterproscan
IPR037171Homologous_superfamilyNagB/RpiA transferase-likeInterproscan
IPR000649FamilyInitiation factor 2B-relatedInterproscan
IPR051855FamilyEukaryotic initiation factor 2B subunit betaInterproscan
IPR034819FamilyCytoplasmic polyadenylation element-binding proteinInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR038446Homologous_superfamilyCEBP, ZZ domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR032296DomainCytoplasmic polyadenylation element-binding protein, ZZ domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10133DNA POLYMERASE IInterproscan
PTHR46492DYNEIN ASSEMBLY FACTOR 4, AXONEMALInterproscan
PTHR10083KUNITZ-TYPE PROTEASE INHIBITOR-RELATEDInterproscan
PTHR15526MUSKELINInterproscan
PTHR46877EPH RECEPTOR A5Interproscan
PTHR10458PEPTIDE DEFORMYLASEInterproscan
PTHR10663GUANYL-NUCLEOTIDE EXCHANGE FACTORInterproscan
PTHR46345INVERTED FORMIN-2Interproscan
PTHR10342ARYLSULFATASEInterproscan
PTHR45859TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETAInterproscan
PTHR12566CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEBInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006139Biological Processnucleobase-containing compound metabolic processInterproscan
GO:0008408Molecular Function3'-5' exonuclease activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0006261Biological ProcessDNA-templated DNA replicationInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0008409Molecular Function5'-3' exonuclease activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003341Biological Processcilium movementInterproscan
GO:0036158Biological Processouter dynein arm assemblyInterproscan
GO:0036159Biological Processinner dynein arm assemblyInterproscan
GO:0004867Molecular Functionserine-type endopeptidase inhibitor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005005Molecular Functiontransmembrane-ephrin receptor activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0007411Biological Processaxon guidanceInterproscan
GO:0030425Cellular ComponentdendriteInterproscan
GO:0048013Biological Processephrin receptor signaling pathwayInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0018206Biological Processpeptidyl-methionine modificationInterproscan
GO:0042586Molecular Functionpeptide deformylase activityInterproscan
GO:0008484Molecular Functionsulfuric ester hydrolase activityInterproscan
GO:0044237Biological Processobsolete cellular metabolic processInterproscan
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005851Cellular Componenteukaryotic translation initiation factor 2B complexInterproscan
GO:0006413Biological Processtranslational initiationInterproscan
GO:0003730Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0006417Biological Processregulation of translationInterproscan
GO:0045182Molecular Functiontranslation regulator activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02335polA; DNA polymerase IEC:2.7.7.7
Messenger RNA biogenesisko03019deepkoala
Translation factorsko03012deepkoala
Cytoskeleton proteinsko04812deepkoala
Enzymes with EC numbers-deepkoala
DNA repair and recombination proteinsko03400deepkoala

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