Gene detail

Detailed information of g5704.t1 in Montipora capitata

Genomic Location: Sc0000116:177484...181689
NR annotation: XP_029181426.2, ras GTPase-activating protein-binding protein 1-like isoform X1 [Acropora millepora]
Species Montipora capitata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9UN86	Ras GTPase-activating protein-binding protein 2 OS=Homo sapiens OX=9606 GN=G3BP2 PE=1 SV=2
P97379	Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2 PE=1 SV=2
Q5R9L3	Ras GTPase-activating protein-binding protein 2 OS=Pongo abelii OX=9601 GN=G3BP2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007518 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02136 all species →	NTF2	Nuclear transport factor 2 (NTF2) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032710 all species →	Homologous_superfamily	NTF2-like domain superfamily	Interproscan
IPR018222 all species →	Domain	Nuclear transport factor 2, eukaryote	Interproscan
IPR002075 all species →	Domain	Nuclear transport factor 2 domain	Interproscan
IPR035979 all species →	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR039539 all species →	Family	Ras GTPase-activating protein-binding protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10693 all species →	RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0003729 all species →	Molecular Function	mRNA binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:1990904 all species →	Cellular Component	ribonucleoprotein complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g5704.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.