Detailed information of g571.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_028846894.1, mannose-1-phosphate guanyltransferase alpha-A isoform X1 [Denticeps clupeoides]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q7SXP8Mannose-1-phosphate guanylyltransferase regulatory subunit alpha-B OS=Danio rerio OX=7955 GN=gmppab PE=2 SV=1
Q0VFM6Mannose-1-phosphate guanylyltransferase regulatory subunit alpha OS=Xenopus tropicalis OX=8364 GN=gmppa PE=2 SV=1
Q6DKE9Mannose-1-phosphate guanyltransferase alpha-A OS=Xenopus laevis OX=8355 GN=gmppa-a PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyE3|E3 activity RING|U-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04051TRAPPTransport protein particle (TRAPP) componentFamilyInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF16450Prot_ATP_ID_OB_CProteasomal ATPase OB C-terminal domainDomainInterproscan
PF00483NTP_transferaseNucleotidyl transferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037992FamilyTRAPP complex, Trs33 subunitInterproscan
IPR007194FamilyTransport protein particle (TRAPP) componentInterproscan
IPR024096Homologous_superfamilyNO signalling/Golgi transport ligand-binding domain superfamilyInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR003613DomainU-box domainInterproscan
IPR029021Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR050687FamilyDynein Intermediate ChainInterproscan
IPR032501DomainProteasomal ATPase, second OB domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR029044Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR005835DomainNucleotidyl transferase domainInterproscan
IPR050486FamilyMannose-1-phosphate guanyltransferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12817TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6BInterproscan
PTHR10131TNF RECEPTOR ASSOCIATED FACTORInterproscan
PTHR12442DYNEIN INTERMEDIATE CHAINInterproscan
PTHR35169FE2OG DIOXYGENASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR22572SUGAR-1-PHOSPHATE GUANYL TRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0043087Biological Processregulation of GTPase activityInterproscan
GO:0048193Biological ProcessGolgi vesicle transportInterproscan
GO:0005801Cellular Componentcis-Golgi networkInterproscan
GO:0005802Cellular Componenttrans-Golgi networkInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0030008Cellular ComponentTRAPP complexInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003341Biological Processcilium movementInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0036157Cellular Componentouter dynein armInterproscan
GO:0036158Biological Processouter dynein arm assemblyInterproscan
GO:0045503Molecular Functiondynein light chain bindingInterproscan
GO:0045504Molecular Functiondynein heavy chain bindingInterproscan
GO:0009058Biological Processbiosynthetic processInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20304TRAPPC6, TRS33; trafficking protein particle complex subunit 6-Membrane traffickingko04131deepkoala

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