Detailed information of g58.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3183057.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P36080Ribosomal RNA-processing protein 14 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RRP14 PE=1 SV=1
Q5ZIH2Vacuolar fusion protein MON1 homolog A OS=Gallus gallus OX=9031 GN=MON1A PE=2 SV=1
Q95KG9Vacuolar fusion protein MON1 homolog A OS=Macaca fascicularis OX=9541 GN=MON1A PE=2 SV=2
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01839FG-GAPFG-GAP repeatRepeatInterproscan
PF13517FG-GAP_3FG-GAP-like repeatRepeatInterproscan
PF00255GSHPxGlutathione peroxidaseFamilyInterproscan
PF19038Fuz_longin_3Third Longin domain of FUZ, MON1 and HPS1DomainInterproscan
PF19036Fuz_longin_1First Longin domain of FUZ, MON1 and HPS1DomainInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF18307Tfb2_CTranscription factor Tfb2 (p52) C-terminal domainDomainInterproscan
PF03849Tfb2Transcription factor Tfb2FamilyInterproscan
PF04935SURF6Surfeit locus protein 6FamilyInterproscan
PF15459RRP1460S ribosome biogenesis protein Rrp14FamilyInterproscan
PF02140Gal_LectinGalactose binding lectin domainDomainInterproscan
PF00225KinesinKinesin motor domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028994Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR013517RepeatFG-GAP repeatInterproscan
IPR000889FamilyGlutathione peroxidaseInterproscan
IPR029760Conserved_siteGlutathione peroxidase conserved siteInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR004353FamilyVacuolar fusion protein Mon1Interproscan
IPR043970DomainFUZ/MON1/HPS1, third Longin domainInterproscan
IPR043972DomainFUZ/MON1/HPS1, first Longin domainInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR050370FamilyHairy and Enhancer of Split/HEY-relatedInterproscan
IPR040662DomainTranscription factor Tfb2, C-terminal domainInterproscan
IPR004598FamilyTranscription factor TFIIH subunit p52/Tfb2Interproscan
IPR029190DomainRibosomal RNA-processing protein 14/surfeit locus protein 6, C-terminal domainInterproscan
IPR029188DomainRibosomal RNA-processing protein 14, N-terminalInterproscan
IPR007019FamilySurfeit locus 6Interproscan
IPR043159Homologous_superfamilyD-galactoside/L-rhamnose binding SUEL lectin domain superfamilyInterproscan
IPR000922DomainD-galactoside/L-rhamnose binding SUEL lectin domainInterproscan
IPR001752DomainKinesin motor domainInterproscan
IPR019821Conserved_siteKinesin motor domain, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR036961Homologous_superfamilyKinesin motor domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46580SENSOR KINASE-RELATEDInterproscan
PTHR11592GLUTATHIONE PEROXIDASEInterproscan
PTHR13027SAND PROTEIN-RELATEDInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10985BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATEDInterproscan
PTHR13152TFIIH, POLYPEPTIDE 4Interproscan
PTHR14369SURFEIT LOCUS PROTEIN 6Interproscan
PTHR46780PROTEIN EVA-1Interproscan
PTHR47117STAR-RELATED LIPID TRANSFER PROTEIN 9Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004601Molecular Functionperoxidase activityInterproscan
GO:0006979Biological Processresponse to oxidative stressInterproscan
GO:0004602Molecular Functionglutathione peroxidase activityInterproscan
GO:0006623Biological Processprotein targeting to vacuoleInterproscan
GO:0035658Cellular ComponentMon1-Ccz1 complexInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0000439Cellular Componenttranscription factor TFIIH core complexInterproscan
GO:0001671Molecular FunctionATPase activator activityInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005675Cellular Componenttranscription factor TFIIH holo complexInterproscan
GO:0070816Biological Processobsolete phosphorylation of RNA polymerase II C-terminal domainInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0042273Biological Processribosomal large subunit biogenesisInterproscan
GO:0042274Biological Processribosomal small subunit biogenesisInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0003777Molecular Functionmicrotubule motor activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03144TFIIH4, GTF2H4, TFB2; transcription initiation factor TFIIH subunit 4-Pathways of neurodegeneration - multiple diseasesko05022deepkoala
DNA repair and recombination proteinsko03400deepkoala

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