Gene detail

Detailed information of g5815.t1.1 in Hydra viridissima

Genomic Location: :...
NR annotation: XP_002159074.3, E3 ubiquitin-protein ligase PDZRN3 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q6ZMN7	PDZ domain-containing RING finger protein 4 OS=Homo sapiens OX=9606 GN=PDZRN4 PE=1 SV=3
Q76G19	PDZ domain-containing protein 4 OS=Homo sapiens OX=9606 GN=PDZD4 PE=1 SV=1
Q9QY39	PDZ domain-containing protein 4 OS=Mus musculus OX=10090 GN=Pdzd4 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13923	zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan
PF00595	PDZ	PDZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001478	Domain	PDZ domain	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR051971	Family	E3 ubiquitin-protein ligase PDZ domain-containing protein	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15545	PDZ DOMAIN CONTAINING RING FINGER PROTEIN 3, 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15682	PDZRN3_4, LNX3_4; ligand of Numb protein X 3/4	EC:2.3.2.27	Ubiquitin system	ko04121	deepkoala