Detailed information of g5841.t1.1 in Dendrophyllia cribrosa

Genomic Location: :...
NR annotation: CAH3161445.1, unnamed protein product, partial [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
F7J220Scavenger receptor cysteine-rich domain superfamily protein OS=Patiria pectinifera OX=7594 GN=SRCR1 PE=1 SV=1
O08762Neurotrypsin OS=Mus musculus OX=10090 GN=Prss12 PE=1 SV=1
G3V801Neurotrypsin OS=Rattus norvegicus OX=10116 GN=Prss12 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|U-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF00431CUBCUB domainDomainInterproscan
PF01822WSCWSC domainDomainInterproscan
PF04564U-boxU-box domainDomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000859DomainCUB domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR001190DomainSRCR domainInterproscan
IPR000998DomainMAM domainInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR003613DomainU-box domainInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR052291FamilyScavenger receptor cysteine-rich domain-containing proteinInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19331SCAVENGER RECEPTOR DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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