Detailed information of g59.t1 in Acropora digitifera

Genomic Location: chr1Alt:830010...839677
NR annotation: XP_015747786.1, PREDICTED: hemicentin-1-like, partial [Acropora digitifera]
Species abbreviation ADIGI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
Q8NDA2Hemicentin-2 OS=Homo sapiens OX=9606 GN=HMCN2 PE=1 SV=4
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927
all species →
Ig_3Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007110
all species →
DomainImmunoglobulin-like domainInterproscan
IPR013783
all species →
Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003598
all species →
DomainImmunoglobulin subtype 2Interproscan
IPR050958
all species →
FamilyCell Adhesion and Cytoskeletal OrganizationInterproscan
IPR003599
all species →
DomainImmunoglobulin subtypeInterproscan
IPR036179
all species →
Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45080
all species →
CONTACTIN 5Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0007156
all species →
Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g59.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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