Gene detail

Detailed information of g59.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: CAH3121406.1, unnamed protein product [Pocillopora meandrina]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O13821	Vacuolar protein sorting-associated protein 27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sst4 PE=3 SV=1
Q8BIJ7	RUN and FYVE domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rufy1 PE=1 SV=1
Q5ABD9	Vacuolar protein sorting-associated protein 27 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=VPS27 PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000106 (this species only)
Orthogroup (gene family)	OG0000938 (this species only)
Orthogroup (gene family)	OG0000990 (this species only)
Orthogroup (gene family)	OG0001031 (this species only)
Orthogroup (gene family)	OG0001630 (this species only)
Orthogroup (gene family)	OG0001713 (this species only)
Orthogroup (gene family)	OG0002311 (this species only)
Orthogroup (gene family)	OG0003832 (this species only)
Orthogroup (gene family)	OG0004639 (this species only)
Orthogroup (gene family)	OG0004849 (this species only)
Orthogroup (gene family)	OG0006440 (this species only)
Orthogroup (gene family)	OG0006619 (this species only)
Orthogroup (gene family)	OG0012408 (this species only)
Orthogroup (gene family)	OG0048331 (this species only)
Orthogroup (gene family)	OG0174501 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03184 all species →	DDE_1	DDE superfamily endonuclease	Family	Interproscan
PF06602 all species →	Myotub-related	Myotubularin-like phosphatase domain	Domain	Interproscan
PF00122 all species →	E1-E2_ATPase	E1-E2 ATPase	Family	Interproscan
PF00690 all species →	Cation_ATPase_N	Cation transporter/ATPase, N-terminus	Domain	Interproscan
PF13499 all species →	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF14529 all species →	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan
PF01363 all species →	FYVE	FYVE zinc finger	Domain	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF02984 all species →	Cyclin_C	Cyclin, C-terminal domain	Domain	Interproscan
PF16500 all species →	Cyclin_N2	Cyclin-A N-terminal APC/C binding region	Disordered	Interproscan
PF01545 all species →	Cation_efflux	Cation efflux family	Family	Interproscan
PF00134 all species →	Cyclin_N	Cyclin, N-terminal domain	Domain	Interproscan
PF19798 all species →	Sulfotransfer_5	Sulfotransferase domain	Domain	Interproscan
PF00441 all species →	Acyl-CoA_dh_1	Acyl-CoA dehydrogenase, C-terminal domain	Domain	Interproscan
PF02771 all species →	Acyl-CoA_dh_N	Acyl-CoA dehydrogenase, N-terminal domain	Domain	Interproscan
PF02770 all species →	Acyl-CoA_dh_M	Acyl-CoA dehydrogenase, middle domain	Domain	Interproscan
PF09286 all species →	Pro-kuma_activ	Pro-kumamolisin, activation domain	Domain	Interproscan
PF00082 all species →	Peptidase_S8	Subtilase family	Domain	Interproscan
PF00076 all species →	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035976 all species →	Homologous_superfamily	Sushi/SCR/CCP superfamily	Interproscan
IPR000436 all species →	Domain	Sushi/SCR/CCP domain	Interproscan
IPR011936 all species →	Repeat	Myxococcus cysteine-rich repeat	Interproscan
IPR043543 all species →	Family	Pappalysin-1/2	Interproscan
IPR050863 all species →	Family	Centromere and Transposable Element-Derived Protein	Interproscan
IPR004875 all species →	Domain	DDE superfamily endonuclease domain	Interproscan
IPR010569 all species →	Domain	Myotubularin-like, phosphatase domain	Interproscan
IPR030564 all species →	Family	Myotubularin family	Interproscan
IPR029021 all species →	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR023298 all species →	Homologous_superfamily	P-type ATPase, transmembrane domain superfamily	Interproscan
IPR004014 all species →	Domain	Cation-transporting P-type ATPase, N-terminal	Interproscan
IPR008250 all species →	Homologous_superfamily	P-type ATPase, A domain superfamily	Interproscan
IPR001757 all species →	Family	P-type ATPase	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR052591 all species →	Family	Calcium-Dependent Signaling Protein	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR036691 all species →	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR005135 all species →	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR043128 all species →	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR052560 all species →	Family	RNA-directed DNA polymerase, mobile element	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR051165 all species →	Family	Multifunctional Ankyrin Repeat Domain-Containing Protein	Interproscan
IPR017455 all species →	Domain	Zinc finger, FYVE-related	Interproscan
IPR000306 all species →	Domain	FYVE zinc finger	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR011011 all species →	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR027469 all species →	Homologous_superfamily	Cation efflux transmembrane domain superfamily	Interproscan
IPR004367 all species →	Domain	Cyclin, C-terminal domain	Interproscan
IPR032447 all species →	Domain	Cyclin-A, N-terminal APC/C binding region	Interproscan
IPR013763 all species →	Domain	Cyclin-like domain	Interproscan
IPR036915 all species →	Homologous_superfamily	Cyclin-like superfamily	Interproscan
IPR002524 all species →	Family	Cation efflux protein	Interproscan
IPR006671 all species →	Domain	Cyclin, N-terminal	Interproscan
IPR048258 all species →	Conserved_site	Cyclins, cyclin-box	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR053226 all species →	Family	Pyrrolopyrazine Biosynthesis Cluster Protein F	Interproscan
IPR006089 all species →	Conserved_site	Acyl-CoA dehydrogenase, conserved site	Interproscan
IPR009075 all species →	Domain	Acyl-CoA dehydrogenase/oxidase, C-terminal	Interproscan
IPR037069 all species →	Homologous_superfamily	Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily	Interproscan
IPR013786 all species →	Domain	Acyl-CoA dehydrogenase/oxidase, N-terminal	Interproscan
IPR006091 all species →	Domain	Acyl-CoA oxidase/dehydrogenase, middle domain	Interproscan
IPR046373 all species →	Homologous_superfamily	Acyl-CoA oxidase/dehydrogenase, middle domain superfamily	Interproscan
IPR009100 all species →	Homologous_superfamily	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily	Interproscan
IPR034183 all species →	Family	Isovaleryl-CoA dehydrogenase	Interproscan
IPR036250 all species →	Homologous_superfamily	Acyl-CoA dehydrogenase-like, C-terminal	Interproscan
IPR015366 all species →	Domain	Peptidase S53, activation domain	Interproscan
IPR036852 all species →	Homologous_superfamily	Peptidase S8/S53 domain superfamily	Interproscan
IPR030400 all species →	Domain	Sedolisin domain	Interproscan
IPR023828 all species →	Active_site	Peptidase S8, subtilisin, Ser-active site	Interproscan
IPR000209 all species →	Domain	Peptidase S8/S53 domain	Interproscan
IPR050819 all species →	Family	Tripeptidyl-peptidase I and related peptidases	Interproscan
IPR000504 all species →	Domain	RNA recognition motif domain	Interproscan
IPR035979 all species →	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR003954 all species →	Domain	RNA recognition motif domain, eukaryote	Interproscan
IPR050441 all species →	Family	RNA-binding motif	Interproscan
IPR012677 all species →	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46130 all species →	LAMGL DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR19303 all species →	TRANSPOSON	Interproscan
PTHR10807 all species →	MYOTUBULARIN-RELATED	Interproscan
PTHR42861 all species →	CALCIUM-TRANSPORTING ATPASE	Interproscan
PTHR23064 all species →	TROPONIN	Interproscan
PTHR36688 all species →	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR24123 all species →	ANKYRIN REPEAT-CONTAINING	Interproscan
PTHR45820 all species →	FI23527P1	Interproscan
PTHR48331 all species →	SULFOTRANSFERASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR43884 all species →	ACYL-COA DEHYDROGENASE	Interproscan
PTHR14218 all species →	PROTEASE S8 TRIPEPTIDYL PEPTIDASE I CLN2	Interproscan
PTHR48034 all species →	TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004222 all species →	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0007166 all species →	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0004438 all species →	Molecular Function	phosphatidylinositol-3-phosphate phosphatase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0046856 all species →	Biological Process	phosphatidylinositol dephosphorylation	Interproscan
GO:0052629 all species →	Molecular Function	phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity	Interproscan
GO:0005388 all species →	Molecular Function	P-type calcium transporter activity	Interproscan
GO:0006874 all species →	Biological Process	intracellular calcium ion homeostasis	Interproscan
GO:0015662 all species →	Molecular Function	P-type ion transporter activity	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan
GO:0034220 all species →	Biological Process	monoatomic ion transmembrane transport	Interproscan
GO:0070588 all species →	Biological Process	calcium ion transmembrane transport	Interproscan
GO:0005215 all species →	Molecular Function	transporter activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005385 all species →	Molecular Function	zinc ion transmembrane transporter activity	Interproscan
GO:0006882 all species →	Biological Process	intracellular zinc ion homeostasis	Interproscan
GO:0010312 all species →	Biological Process	detoxification of zinc ion	Interproscan
GO:0071577 all species →	Biological Process	zinc ion transmembrane transport	Interproscan
GO:0006812 all species →	Biological Process	monoatomic cation transport	Interproscan
GO:0008324 all species →	Molecular Function	monoatomic cation transmembrane transporter activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0003995 all species →	Molecular Function	acyl-CoA dehydrogenase activity	Interproscan
GO:0016627 all species →	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan
GO:0050660 all species →	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0006552 all species →	Biological Process	L-leucine catabolic process	Interproscan
GO:0008470 all species →	Molecular Function	3-methylbutanoyl-CoA dehydrogenase activity	Interproscan
GO:0008236 all species →	Molecular Function	serine-type peptidase activity	Interproscan
GO:0004252 all species →	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0004175 all species →	Molecular Function	endopeptidase activity	Interproscan
GO:0007417 all species →	Biological Process	central nervous system development	Interproscan
GO:0008240 all species →	Molecular Function	tripeptidyl-peptidase activity	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005681 all species →	Cellular Component	spliceosomal complex	Interproscan
GO:0048026 all species →	Biological Process	positive regulation of mRNA splicing, via spliceosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00253	IVD, ivd; isovaleryl-CoA dehydrogenase	EC:1.3.8.4	Valine, leucine and isoleucine degradation	ko00280	deepkoala
K01279	TPP1, CLN2; tripeptidyl-peptidase I	EC:3.4.14.9	Exosome	ko04147	deepkoala
K12741	HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.