Gene detail

Detailed information of g592.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_044591075.1, uncharacterized protein LOC123269437 [Cotesia glomerata]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3SZE2	Prefoldin subunit 1 OS=Bos taurus OX=9913 GN=PFDN1 PE=2 SV=1
Q5RAM7	Prefoldin subunit 1 OS=Pongo abelii OX=9601 GN=PFDN1 PE=2 SV=1
Q5D016	Prefoldin subunit 1 OS=Danio rerio OX=7955 GN=pfdn1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000101 (this species only)
Orthogroup (gene family)	OG0000183 (this species only)
Orthogroup (gene family)	OG0000534 (this species only)
Orthogroup (gene family)	OG0000732 (this species only)
Orthogroup (gene family)	OG0004053 (this species only)
Orthogroup (gene family)	OG0004641 (this species only)
Orthogroup (gene family)	OG0004691 (this species only)
Orthogroup (gene family)	OG0005398 (this species only)
Orthogroup (gene family)	OG0009152 (this species only)
Orthogroup (gene family)	OG0009746 (this species only)
Orthogroup (gene family)	OG0012158 (this species only)
Orthogroup (gene family)	OG0015846 (this species only)
Orthogroup (gene family)	OG0059718 (this species only)
Orthogroup (gene family)	OG0080630 (this species only)
Orthogroup (gene family)	OG0171091 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00068 all species →	Phospholip_A2_1	Phospholipase A2	Domain	Interproscan
PF03378 all species →	CAS_CSE1	CAS/CSE protein, C-terminus	Repeat	Interproscan
PF08506 all species →	Cse1	Cse1	Repeat	Interproscan
PF10545 all species →	MADF_DNA_bdg	Alcohol dehydrogenase transcription factor Myb/SANT-like	Domain	Interproscan
PF00754 all species →	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF17284 all species →	Spermine_synt_N	Spermidine synthase tetramerisation domain	Domain	Interproscan
PF01920 all species →	Prefoldin_2	Prefoldin subunit	Coiled-coil	Interproscan
PF06401 all species →	Alpha-2-MRAP_C	Alpha-2-macroglobulin RAP, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002052 all species →	Conserved_site	DNA methylase, N-6 adenine-specific, conserved site	Interproscan
IPR050320 all species →	Family	Protein N5-glutamine methyltransferase	Interproscan
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR036444 all species →	Homologous_superfamily	Phospholipase A2 domain superfamily	Interproscan
IPR001211 all species →	Family	Phospholipase A2	Interproscan
IPR016090 all species →	Domain	Phospholipase A2 domain	Interproscan
IPR033112 all species →	Active_site	Phospholipase A2, aspartic acid active site	Interproscan
IPR033113 all species →	Active_site	Phospholipase A2, histidine active site	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR005043 all species →	Domain	Exportin-2, C-terminal	Interproscan
IPR013713 all species →	Domain	Exportin-2, central domain	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR006578 all species →	Domain	MADF domain	Interproscan
IPR051941 all species →	Family	Blood Group Antigen-Binding Lectin	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR006585 all species →	Domain	Fucolectin tachylectin-4 pentraxin-1	Interproscan
IPR000421 all species →	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR020472 all species →	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR028608 all species →	Family	Probable cytosolic iron-sulfur protein assembly protein, CIAO1/Cia1	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR035246 all species →	Domain	Spermidine synthase, tetramerisation domain	Interproscan
IPR037163 all species →	Homologous_superfamily	Spermidine synthase, tetramerisation domain superfamily	Interproscan
IPR030374 all species →	Domain	Polyamine biosynthesis domain	Interproscan
IPR002777 all species →	Family	Prefoldin beta-like	Interproscan
IPR010483 all species →	Domain	Alpha-2-macroglobulin RAP, C-terminal	Interproscan
IPR009053 all species →	Homologous_superfamily	Prefoldin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18895 all species →	HEMK METHYLTRANSFERASE	Interproscan
PTHR11716 all species →	PHOSPHOLIPASE A2 FAMILY MEMBER	Interproscan
PTHR10997 all species →	IMPORTIN-7, 8, 11	Interproscan
PTHR21505 all species →	UNCHARACTERIZED	Interproscan
PTHR45713 all species →	FTP DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR24241 all species →	NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR	Interproscan
PTHR19920 all species →	WD40 PROTEIN CIAO1	Interproscan
PTHR46601 all species →	ULP_PROTEASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR20903 all species →	PREFOLDIN SUBUNIT 1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0008168 all species →	Molecular Function	methyltransferase activity	Interproscan
GO:0032259 all species →	Biological Process	methylation	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0004623 all species →	Molecular Function	phospholipase A2 activity	Interproscan
GO:0006644 all species →	Biological Process	phospholipid metabolic process	Interproscan
GO:0050482 all species →	Biological Process	arachidonate secretion	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0016042 all species →	Biological Process	lipid catabolic process	Interproscan
GO:0005543 all species →	Molecular Function	phospholipid binding	Interproscan
GO:0047498 all species →	Molecular Function	calcium-dependent phospholipase A2 activity	Interproscan
GO:0005049 all species →	Molecular Function	nuclear export signal receptor activity	Interproscan
GO:0005635 all species →	Cellular Component	nuclear envelope	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006606 all species →	Biological Process	protein import into nucleus	Interproscan
GO:0006611 all species →	Biological Process	protein export from nucleus	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0032870 all species →	Biological Process	cellular response to hormone stimulus	Interproscan
GO:0042277 all species →	Molecular Function	peptide binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016226 all species →	Biological Process	iron-sulfur cluster assembly	Interproscan
GO:0097361 all species →	Cellular Component	cytosolic [4Fe-4S] assembly targeting complex	Interproscan
GO:0006457 all species →	Biological Process	protein folding	Interproscan
GO:0016272 all species →	Cellular Component	prefoldin complex	Interproscan
GO:0051082 all species →	Molecular Function	unfolded protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0044183 all species →	Molecular Function	protein folding chaperone	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0008201 all species →	Molecular Function	heparin binding	Interproscan
GO:0050750 all species →	Molecular Function	low-density lipoprotein particle receptor binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01047	PLA2G, SPLA2; secretory phospholipase A2	EC:3.1.1.4	Chromosome and associated proteins	ko03036	deepkoala
K09548	PFDN1; prefoldin subunit 1	-	Chaperones and folding catalysts	ko03110	deepkoala
K18423	CSE1, CAS, XPO2; exportin-2 (importin alpha re-exporter)	-	Chromosome and associated proteins	ko03036	deepkoala
K24730	CIAO1, CIA1; cytosolic iron-sulfur protein assembly protein CIAO1	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.