Detailed information of g594.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_013389850.1, condensin complex subunit 3-like [Lingula anatina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9BPX3Condensin complex subunit 3 OS=Homo sapiens OX=9606 GN=NCAPG PE=1 SV=1
Q9YHB5Condensin complex subunit 3 OS=Xenopus laevis OX=8355 GN=ncapg PE=1 SV=1
Q10429Condensin complex subunit 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cnd3 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyARID
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00068Phospholip_A2_1Phospholipase A2DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF04103CD20CD20-like familyFamilyInterproscan
PF01388ARIDARID/BRIGHT DNA binding domainDomainInterproscan
PF00173Cyt-b5Cytochrome b5-like Heme/Steroid binding domainDomainInterproscan
PF10545MADF_DNA_bdgAlcohol dehydrogenase transcription factor Myb/SANT-likeDomainInterproscan
PF12719Cnd3Nuclear condensing complex subunits, C-term domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016090DomainPhospholipase A2 domainInterproscan
IPR033113Active_sitePhospholipase A2, histidine active siteInterproscan
IPR036444Homologous_superfamilyPhospholipase A2 domain superfamilyInterproscan
IPR001211FamilyPhospholipase A2Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR050505FamilyWD repeat-containing protein WDR55/POC1Interproscan
IPR007237FamilyCD20-like familyInterproscan
IPR001606DomainARID DNA-binding domainInterproscan
IPR036431Homologous_superfamilyARID DNA-binding domain superfamilyInterproscan
IPR045147FamilyAT-rich interactive domain-containing protein 3Interproscan
IPR036400Homologous_superfamilyCytochrome b5-like heme/steroid binding domain superfamilyInterproscan
IPR052320FamilyCytochrome b5 domain-containingInterproscan
IPR001199DomainCytochrome b5-like heme/steroid binding domainInterproscan
IPR006578DomainMADF domainInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR025977DomainNuclear condensin complex subunit 3, C-terminal domainInterproscan
IPR027165FamilyCondensin complex subunit 3Interproscan
IPR027272FamilyPiezo familyInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11716PHOSPHOLIPASE A2 FAMILY MEMBERInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR44019WD REPEAT-CONTAINING PROTEIN 55Interproscan
PTHR39952FI02073PInterproscan
PTHR15348AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHTInterproscan
PTHR21281UNCHARACTERIZEDInterproscan
PTHR14418CONDENSIN COMPLEX SUBUNIT 3-RELATEDInterproscan
PTHR47049PIEZO-TYPE MECHANOSENSITIVE ION CHANNEL HOMOLOGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004623Molecular Functionphospholipase A2 activityInterproscan
GO:0006644Biological Processphospholipid metabolic processInterproscan
GO:0050482Biological Processarachidonate secretionInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016042Biological Processlipid catabolic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0000793Cellular Componentcondensed chromosomeInterproscan
GO:0000796Cellular Componentcondensin complexInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0007076Biological Processmitotic chromosome condensationInterproscan
GO:0008381Molecular Functionmechanosensitive monoatomic ion channel activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01047PLA2G, SPLA2; secretory phospholipase A2EC:3.1.1.4
Chromosome and associated proteinsko03036deepkoala
Chromosome and associated proteinsko03036deepkoala

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