Gene detail

Detailed information of g595.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_047129276.1, rho GTPase-activating protein 19-like isoform X2 [Hydra vulgaris]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q14CB8	Rho GTPase-activating protein 19 OS=Homo sapiens OX=9606 GN=ARHGAP19 PE=1 SV=1
Q8BRH3	Rho GTPase-activating protein 19 OS=Mus musculus OX=10090 GN=Arhgap19 PE=1 SV=2
Q5F3G0	Rho GTPase-activating protein 19 OS=Gallus gallus OX=9031 GN=ARHGAP19 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000431 (this species only)
Orthogroup (gene family)	OG0000613 (this species only)
Orthogroup (gene family)	OG0000696 (this species only)
Orthogroup (gene family)	OG0003709 (this species only)
Orthogroup (gene family)	OG0005904 (this species only)
Orthogroup (gene family)	OG0005937 (this species only)
Orthogroup (gene family)	OG0008126 (this species only)
Orthogroup (gene family)	OG0008574 (this species only)
Orthogroup (gene family)	OG0008669 (this species only)
Orthogroup (gene family)	OG0009649 (this species only)
Orthogroup (gene family)	OG0011847 (this species only)
Orthogroup (gene family)	OG0032602 (this species only)
Orthogroup (gene family)	OG0048269 (this species only)
Orthogroup (gene family)	OG0171510 (this species only)
Orthogroup (gene family)	OG0173035 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05060 all species →	MGAT2	N-acetylglucosaminyltransferase II (MGAT2)	Family	Interproscan
PF00588 all species →	SpoU_methylase	SpoU rRNA Methylase family	Family	Interproscan
PF13613 all species →	HTH_Tnp_4	Helix-turn-helix of DDE superfamily endonuclease	Domain	Interproscan
PF00155 all species →	Aminotran_1_2	Aminotransferase class I and II	Domain	Interproscan
PF03896 all species →	TRAP_alpha	Translocon-associated protein (TRAP), alpha subunit	Family	Interproscan
PF02892 all species →	zf-BED	BED zinc finger	Domain	Interproscan
PF00266 all species →	Aminotran_5	Aminotransferase class-V	Domain	Interproscan
PF04970 all species →	LRAT	Lecithin retinol acyltransferase	Domain	Interproscan
PF00620 all species →	RhoGAP	RhoGAP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029044 all species →	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR007754 all species →	Family	N-acetylglucosaminyltransferase II	Interproscan
IPR029026 all species →	Homologous_superfamily	tRNA (guanine-N1-)-methyltransferase, N-terminal	Interproscan
IPR029028 all species →	Homologous_superfamily	Alpha/beta knot methyltransferases	Interproscan
IPR001537 all species →	Domain	tRNA/rRNA methyltransferase, SpoU type	Interproscan
IPR027805 all species →	Domain	Transposase, Helix-turn-helix domain	Interproscan
IPR004839 all species →	Domain	Aminotransferase, class I/classII	Interproscan
IPR015421 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR015424 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR005595 all species →	Family	Translocon-associated protein (TRAP), alpha subunit	Interproscan
IPR052717 all species →	Family	Vacuolar processing and transposase activity regulators	Interproscan
IPR003656 all species →	Domain	Zinc finger, BED-type	Interproscan
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR015422 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR000192 all species →	Domain	Aminotransferase class V domain	Interproscan
IPR007053 all species →	Domain	LRAT domain	Interproscan
IPR008936 all species →	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR000198 all species →	Domain	Rho GTPase-activating protein domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12871 all species →	BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE II	Interproscan
PTHR23080 all species →	THAP DOMAIN PROTEIN	Interproscan
PTHR42885 all species →	HISTIDINOL-PHOSPHATE AMINOTRANSFERASE-RELATED	Interproscan
PTHR12924 all species →	TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT	Interproscan
PTHR46169 all species →	DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A	Interproscan
PTHR21152 all species →	AMINOTRANSFERASE CLASS V	Interproscan
PTHR14963 all species →	RHO GTPASE ACTIVATING PROTEIN 18,19-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000139 all species →	Cellular Component	Golgi membrane	Interproscan
GO:0005795 all species →	Cellular Component	Golgi stack	Interproscan
GO:0006487 all species →	Biological Process	protein N-linked glycosylation	Interproscan
GO:0008455 all species →	Molecular Function	alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	Interproscan
GO:0009312 all species →	Biological Process	oligosaccharide biosynthetic process	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0006396 all species →	Biological Process	RNA processing	Interproscan
GO:0008173 all species →	Molecular Function	RNA methyltransferase activity	Interproscan
GO:0009058 all species →	Biological Process	biosynthetic process	Interproscan
GO:0030170 all species →	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0004760 all species →	Molecular Function	L-serine-pyruvate transaminase activity	Interproscan
GO:0005777 all species →	Cellular Component	peroxisome	Interproscan
GO:0008453 all species →	Molecular Function	alanine-glyoxylate transaminase activity	Interproscan
GO:0019265 all species →	Biological Process	glycine biosynthetic process, by transamination of glyoxylate	Interproscan
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0051056 all species →	Biological Process	regulation of small GTPase mediated signal transduction	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00736	MGAT2; alpha-1,6-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	EC:2.4.1.143	Glycosyltransferases	ko01003	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.