Detailed information of g596.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_020632049.1, cytochrome P450 27C1-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q091281,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cyp24a1 PE=1 SV=1
Q02318Sterol 26-hydroxylase, mitochondrial OS=Homo sapiens OX=9606 GN=CYP27A1 PE=1 SV=1
Q644411,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial OS=Mus musculus OX=10090 GN=Cyp24a1 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyNrf1
Transcription Factors Familyzf-LITAF-like

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10601zf-LITAF-likeLITAF-like zinc ribbon domainFamilyInterproscan
PF01163RIO1RIO1 familyFamilyInterproscan
PF00067p450Cytochrome P450DomainInterproscan
PF00549Ligase_CoACoA-ligaseDomainInterproscan
PF08442ATP-grasp_2ATP-grasp domainDomainInterproscan
PF00225KinesinKinesin motor domainDomainInterproscan
PF10491Nrf1_DNA-bindNLS-binding and DNA-binding and dimerisation domains of Nrf1FamilyInterproscan
PF10492Nrf1_activ_bdgNrf1 activator activation site binding domainDomainInterproscan
PF00180Iso_dhIsocitrate/isopropylmalate dehydrogenaseDomainInterproscan
PF00462GlutaredoxinGlutaredoxinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006629DomainLPS-induced tumour necrosis factor alpha factorInterproscan
IPR037519FamilyLITAF domain containing proteinInterproscan
IPR017407FamilySerine/threonine-protein kinase Rio1Interproscan
IPR018935Conserved_siteRIO kinase, conserved siteInterproscan
IPR051272FamilyRIO-type Ser/Thr kinaseInterproscan
IPR000687DomainRIO kinaseInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR017972Conserved_siteCytochrome P450, conserved siteInterproscan
IPR036396Homologous_superfamilyCytochrome P450 superfamilyInterproscan
IPR001128FamilyCytochrome P450Interproscan
IPR002401FamilyCytochrome P450, E-class, group IInterproscan
IPR050479FamilyCytochrome P450, families 11 and 27Interproscan
IPR005809FamilySuccinate--CoA ligase-like, beta subunitInterproscan
IPR034723FamilySuccinate--CoA ligase [ADP-forming] subunit beta, mitochondrialInterproscan
IPR013815Homologous_superfamilyATP-grasp fold, subdomain 1Interproscan
IPR016102Homologous_superfamilySuccinyl-CoA synthetase-likeInterproscan
IPR005811DomainATP-citrate synthase/succinyl-CoA ligase, C-terminal domainInterproscan
IPR017866Conserved_siteSuccinyl-CoA synthetase, beta subunit, conserved siteInterproscan
IPR011761DomainATP-grasp foldInterproscan
IPR013650DomainATP-grasp fold, succinyl-CoA synthetase-typeInterproscan
IPR001752DomainKinesin motor domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR027640FamilyKinesin-like proteinInterproscan
IPR019821Conserved_siteKinesin motor domain, conserved siteInterproscan
IPR036961Homologous_superfamilyKinesin motor domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR019525DomainNuclear respiratory factor 1, NLS/DNA-binding, dimerisation domainInterproscan
IPR039142FamilyNRF1/Ewg familyInterproscan
IPR024084DomainIsopropylmalate dehydrogenase-like domainInterproscan
IPR019818Conserved_siteIsocitrate/isopropylmalate dehydrogenase, conserved siteInterproscan
IPR004434FamilyIsocitrate dehydrogenase NAD-dependentInterproscan
IPR011899DomainGlutaredoxin, eukaryotic/virialInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR002109DomainGlutaredoxinInterproscan
IPR014025DomainGlutaredoxin subgroupInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23292LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTORInterproscan
PTHR45723SERINE/THREONINE-PROTEIN KINASE RIO1Interproscan
PTHR24279-Interproscan
PTHR11815SUCCINYL-COA SYNTHETASE BETA CHAINInterproscan
PTHR47969CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATEDInterproscan
PTHR20338NUCLEAR RESPIRATORY FACTOR 1Interproscan
PTHR11835DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATEInterproscan
PTHR45694GLUTAREDOXIN 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0030490Biological Processmaturation of SSU-rRNAInterproscan
GO:0030688Cellular Componentpreribosome, small subunit precursorInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0004497Molecular Functionmonooxygenase activityInterproscan
GO:0020037Molecular Functionheme bindingInterproscan
GO:0005743Cellular Componentmitochondrial inner membraneInterproscan
GO:0006700Biological ProcessC21-steroid hormone biosynthetic processInterproscan
GO:0006704Biological Processglucocorticoid biosynthetic processInterproscan
GO:0008203Biological Processcholesterol metabolic processInterproscan
GO:0034650Biological Processcortisol metabolic processInterproscan
GO:0071375Biological Processcellular response to peptide hormone stimulusInterproscan
GO:0006099Biological Processtricarboxylic acid cycleInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0004775Molecular Functionsuccinate-CoA ligase (ADP-forming) activityInterproscan
GO:0006104Biological Processsuccinyl-CoA metabolic processInterproscan
GO:0042709Cellular Componentsuccinate-CoA ligase complexInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0003777Molecular Functionmicrotubule motor activityInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0005875Cellular Componentmicrotubule associated complexInterproscan
GO:0007052Biological Processmitotic spindle organizationInterproscan
GO:0051231Biological Processspindle elongationInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006102Biological Processisocitrate metabolic processInterproscan
GO:0000287Molecular Functionmagnesium ion bindingInterproscan
GO:0016616Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan
GO:0051287Molecular FunctionNAD bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0015038Molecular Functionglutathione disulfide oxidoreductase activityInterproscan
GO:0034599Biological Processcellular response to oxidative stressInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03676grxC, GLRX, GLRX2; glutaredoxin 3-Chromosome and associated proteinsko03036deepkoala
Citrate cycle (TCA cycle)ko00020deepkoala
Mitochondrial biogenesisko03029deepkoala
Messenger RNA biogenesisko03019deepkoala
Ribosome biogenesisko03009deepkoala
Exosomeko04147deepkoala
Chaperones and folding catalystsko03110deepkoala

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