Detailed information of g60.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: AIC75315.1, POU-like homeodomain-containing protein [Aurelia sp. DG-2014]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q17237Silk gland factor 3 OS=Bombyx mori OX=7091 GN=SGF3 PE=2 SV=1
P31361POU domain, class 3, transcription factor 3 OS=Mus musculus OX=10090 GN=Pou3f3 PE=2 SV=2
Q63262POU domain, class 3, transcription factor 3 OS=Rattus norvegicus OX=10116 GN=Pou3f3 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyHomeobox
Transcription Factors FamilyPou

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01302CAP_GLYCAP-Gly domainDomainInterproscan
PF17066RITARBPJ-interacting and tubulin associated proteinFamilyInterproscan
PF10545MADF_DNA_bdgAlcohol dehydrogenase transcription factor Myb/SANT-likeDomainInterproscan
PF01417ENTHENTH domainRepeatInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00226DnaJDnaJ domainDomainInterproscan
PF00157PouPou domain - N-terminal to homeobox domainDomainInterproscan
PF00046HomeodomainHomeodomainDomainInterproscan
PF09747CCD97-like_CCoiled-coil domain containing protein 97-like, C-terminalCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052219FamilyDNA Photolyase Class-2Interproscan
IPR036155Homologous_superfamilyCryptochrome/photolyase, N-terminal domain superfamilyInterproscan
IPR032673Conserved_siteDNA photolyase class 2, conserved siteInterproscan
IPR036134Homologous_superfamilyCryptochrome/DNA photolyase, FAD-binding domain-like superfamilyInterproscan
IPR000938DomainCAP Gly-rich domainInterproscan
IPR036859Homologous_superfamilyCAP Gly-rich domain superfamilyInterproscan
IPR031418FamilyRBPJ-interacting and tubulin-associated protein 1Interproscan
IPR006578DomainMADF domainInterproscan
IPR039353FamilyTranscription factor Adf-1Interproscan
IPR013809DomainENTH domainInterproscan
IPR008942Homologous_superfamilyENTH/VHSInterproscan
IPR003903Conserved_siteUbiquitin interacting motifInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001623DomainDnaJ domainInterproscan
IPR036869Homologous_superfamilyChaperone J-domain superfamilyInterproscan
IPR018253Conserved_siteDnaJ domain, conserved siteInterproscan
IPR044632FamilyDnaJ homolog subfamily C member 25-likeInterproscan
IPR010982Homologous_superfamilyLambda repressor-like, DNA-binding domain superfamilyInterproscan
IPR013847DomainPOU domainInterproscan
IPR000327DomainPOU-specific domainInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR050255FamilyPOU domain transcription factorInterproscan
IPR040233DomainCCD97-like, C-terminalInterproscan
IPR018613FamilyCcdc97-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10211DEOXYRIBODIPYRIMIDINE PHOTOLYASEInterproscan
PTHR18916DYNACTIN 1-RELATED MICROTUBULE-BINDINGInterproscan
PTHR12243MADF DOMAIN TRANSCRIPTION FACTORInterproscan
PTHR12276EPSIN/ENT-RELATEDInterproscan
PTHR21254UNCHARACTERIZEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR44176DNAJ HOMOLOG SUBFAMILY C MEMBER 25Interproscan
PTHR11636POU DOMAINInterproscan
PTHR31840COILED-COIL DOMAIN-CONTAINING PROTEIN 97Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000719Biological Processphotoreactive repairInterproscan
GO:0003904Molecular Functiondeoxyribodipyrimidine photo-lyase activityInterproscan
GO:0000132Biological Processestablishment of mitotic spindle orientationInterproscan
GO:0000776Cellular ComponentkinetochoreInterproscan
GO:0000922Cellular Componentspindle poleInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005875Cellular Componentmicrotubule associated complexInterproscan
GO:0007097Biological Processnuclear migrationInterproscan
GO:0030424Cellular ComponentaxonInterproscan
GO:0031122Biological Processcytoplasmic microtubule organizationInterproscan
GO:0035371Cellular Componentmicrotubule plus-endInterproscan
GO:0051010Molecular Functionmicrotubule plus-end bindingInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0015631Molecular Functiontubulin bindingInterproscan
GO:0051168Biological Processnuclear exportInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0005543Molecular Functionphospholipid bindingInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006897Biological ProcessendocytosisInterproscan
GO:0030125Cellular Componentclathrin vesicle coatInterproscan
GO:0030276Molecular Functionclathrin bindingInterproscan
GO:0005814Cellular ComponentcentrioleInterproscan
GO:0034451Cellular Componentcentriolar satelliteInterproscan
GO:0060271Biological Processcilium assemblyInterproscan
GO:0061511Biological Processcentriole elongationInterproscan
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0006457Biological Processprotein foldingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01669phr, PHR1; deoxyribodipyrimidine photo-lyaseEC:4.1.99.3
Chaperones and folding catalystsko03110deepkoala
Membrane traffickingko04131deepkoala
DNA repair and recombination proteinsko03400deepkoala

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