Detailed information of g600.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_026690494.1, cyclin-J [Ciona intestinalis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P21328RNA-directed DNA polymerase from mobile element jockey OS=Drosophila melanogaster OX=7227 GN=pol PE=1 SV=1
P21329RNA-directed DNA polymerase from mobile element jockey OS=Drosophila funebris OX=7221 GN=jockeypol PE=1 SV=1
Q9UHY1Nuclear receptor-binding protein OS=Homo sapiens OX=9606 GN=NRBP1 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE1|ThiF|ThiF

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00899ThiFThiF familyDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF06726BC10Bladder cancer-related protein BC10FamilyInterproscan
PF12752SUZSUZ domainDomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF02984Cyclin_CCyclin, C-terminal domainDomainInterproscan
PF00134Cyclin_NCyclin, N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023318Homologous_superfamilyUbiquitin activating enzyme, alpha domain superfamilyInterproscan
IPR035985Homologous_superfamilyUbiquitin-activating enzymeInterproscan
IPR000594DomainTHIF-type NAD/FAD binding foldInterproscan
IPR045886FamilyThiF/MoeB/HesA familyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR042622FamilyZinc finger protein 106Interproscan
IPR009598FamilyBladder cancer-related BC10Interproscan
IPR024771DomainSUZ domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR004367DomainCyclin, C-terminal domainInterproscan
IPR046965FamilyCyclin A/B-likeInterproscan
IPR013763DomainCyclin-like domainInterproscan
IPR036915Homologous_superfamilyCyclin-like superfamilyInterproscan
IPR039361FamilyCyclinInterproscan
IPR048258Conserved_siteCyclins, cyclin-boxInterproscan
IPR006671DomainCyclin, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10953UBIQUITIN-ACTIVATING ENZYME E1Interproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR14435ZINC FINGER PROTEIN 106Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR10177CYCLINSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008641Molecular Functionubiquitin-like modifier activating enzyme activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016925Biological Processprotein sumoylationInterproscan
GO:0019948Molecular FunctionSUMO activating enzyme activityInterproscan
GO:0031510Cellular ComponentSUMO activating enzyme complexInterproscan
GO:0032446Biological Processprotein modification by small protein conjugationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0017124Molecular FunctionSH3 domain bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0016538Molecular Functioncyclin-dependent protein serine/threonine kinase regulator activityInterproscan
GO:0044772Biological Processmitotic cell cycle phase transitionInterproscan
GO:0000079Biological Processregulation of cyclin-dependent protein serine/threonine kinase activityInterproscan
GO:0000307Cellular Componentcyclin-dependent protein kinase holoenzyme complexInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18757LARP1; la-related protein 1-Messenger RNA biogenesisko03019deepkoala

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