Detailed information of g6014.t2 in Acropora digitifera

Genomic Location: chr3Alt:11073608...11078726
NR annotation: XP_015777224.1, PREDICTED: peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like isoform X1 [Acropora digitifera]
Species abbreviation ADIGI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076
all species →		RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504
all species →		DomainRNA recognition motif domainInterproscan
IPR035979
all species →		Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR034605
all species →		FamilyPGC-1Interproscan
IPR012677
all species →		Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15528
all species →		PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA COACTIVATOR 1 PGC-1 -RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0003712
all species →		Molecular Functiontranscription coregulator activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0008134
all species →		Molecular Functiontranscription factor bindingInterproscan
GO:0030374
all species →		Molecular Functionnuclear receptor coactivator activityInterproscan
GO:0045944
all species →		Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0051091
all species →		Biological Processpositive regulation of DNA-binding transcription factor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g6014.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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