Detailed information of g6027.t2 in Acropora digitifera

Genomic Location: chr3Alt:11209718...11214157
NR annotation: XP_015777282.1, PREDICTED: RING finger protein 145-like [Acropora digitifera]
Species abbreviation ADIGI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5SWK7RING finger protein 145 OS=Mus musculus OX=10090 GN=Rnf145 PE=1 SV=1
Q0IJ20RING finger protein 145 OS=Xenopus tropicalis OX=8364 GN=rnf145 PE=2 SV=1
Q96MT1RING finger protein 145 OS=Homo sapiens OX=9606 GN=RNF145 PE=1 SV=2
 Gene family
Family typeMembership / link
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13705
all species →
TRC8_NTRC8 N-terminal domainDomainInterproscan
PF13639
all species →
zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan
IPR050731
all species →
FamilyHRD1 family E3 ubiquitin-protein ligasesInterproscan
IPR025754
all species →
DomainTRC8-like, N-terminal domainInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22763
all species →
RING ZINC FINGER PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005783
all species →
Cellular Componentendoplasmic reticulumInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g6027.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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