Gene detail

Detailed information of g6043.t1 in Acropora digitifera

Genomic Location: chr3Alt:11437348...11469060
NR annotation: XP_015777439.1, PREDICTED: adhesion G protein-coupled receptor A3-like isoform X2 [Acropora digitifera]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g6043.t1

ATGATCGAAATAGCTGCCACTATTAATCTCATCTTTATGACGCTTGTGTGGTTTGGATCAGGAATAGAGGCGAAAGTATCTTGTCCGCCAAGGTGTAAATGTACGCTTGTAAAAGAGGGATCTGACAGTTATGTAGTTAACTGCGCCAAGCTTGGGCTGAAGACGCTGATCAACCCAAATGATCTTCCAGAGAACGTCAATAAATTAGATCTCTCTGGAAATTATATTGAAAGAATCGGTAACTACTCCTTCAGAACCACAAATTTAACCAAAATAAAGAAACTGGATTTGTCCAGAAATGACTTACTGAAGATTGAACCAAATGCTTTTGCTGGATTAAATAAATTAACACAAATAGACCTCTCCTTTAATAAATTGTCTGTCCTTCCTGAGGGATTGTTCAGCTCACTTAATAGATTGAAAAAATTAAATCTGGAGCAAAATCCTCTGATATGTGACTGTAATTTAGAGTGGATAGTGAAGTGGCGGAAGCGCTCGAAAAGGTCCTCTGTCCGTGGGCGATGTGTATACCCTTTTGCATTAAGGGATAAGAAAATAGAACAGGTTGACAGAAATGACATGAGTTGTGAAAATCTTGAGCTGCCAGTCATGTCGCTTGGCCCACTGGGAGATGCGATTGCTTTCAAAGGGGACAGTTACAGATTTGAGTGCAAATTTAGCTGGATTCCAGACATCCAAATGATATGGTACAAGGACAGTCAACAACTTCCTTTAAATACCTCAAACAATCACAGAAGTATTTTGTTTAAGTTGGATTCCATCCAGATTGTTTGGGGGAGTACTCTGGAAATAAAAGAGCTTAGTGTGGAGGACAGTGGATTGTATGGTTGTGTTGTCACCTATCCGGGTGACTATAAGTTTACAAGAACCTCTCATCTGTCTGTTATTCCATCGGATTCCCCATTTTGCAATGCTGCTACTACTCCAACTTCTAAAGGAACATTTCATTGGCATGACACTGCAGCAGGAGGAACTGCATTCTTGCCTTGTCCCTTAGGTGTCATGGGGAGTTTTCCTGATCGTAGGGGAGCACAACGAAACTGCTCTGTCAATGGAGATTGGATGGAAGTGGAGGCAGAACCATGTGTCCATGCAAACGAAATAACCCGTGCACTTCATGACTTGAAGGAGAAAGTTGTTAATGACACAACAGTAGCATCAGTGAGTGAACAACTGCTGAACATTTCAAAGCGAGCTGCAAAATTCAGTCATCTTTTGGATGTGGTGTACACAGCTAATGTTGTGCAGAATTTGGCACAGACCATAGGAGGAAACATGACATTCAATTATAATTTGGTCAACACAATCAGTAATATCATGGAAACAGATGCAGAAATTTTGCTTGCAGCTGAGAAGAGGTCAAAGTCTTGTTCCAGCCTGGTGTTACAGCTTAATGCTTTGCATTCAAGATTTCCCCAAGACGTGCAAGCTATGTCATTTGTATCAAACAATATTGTCATCTACTTGGCCCCAATAACATCAACTGATCACAATTTAGACAAGACGTGTTTCGTGAATTCCAGCCTGCAATCAGTCTACCAAGATATTAAGTGTCAATCATGCAGTTCAGTTGAAGCTTGTGAGATGCAAATGGCTCATCTGTCTTCTATATATCTTCCATCATCACTGTTCCCGCTGACTTCAACAGACGAAAATATCAAATTTCAGTTTAGTGTTTTCTCCAATAGTAAACTTTTCCAAGAAGTGAAGGAGGGAAGTAAAAGTAAGCAGTTGGCAAAGATTACAAGCAGTGTGCTTTCACTTCAGTTTGGAGATGCAATGTTGCCAAAACCTACCCAGCCTGTGGTAATCAAATTTGAAAACCACCAGAAAGGAAAACAGCCCTTACCAGTCTACTGGGATTTCAGTTCAAATGGTGGTTTTGGTCGCTGGAAGAAGAATACAGACTGCAGTGAAGTGTTATTTGAAGGCAACCGCATTGTCACGCAGTGTTATCAGCTTTCAAACAGCAACGTCTTTGCTGTTATGATGAATGTCACCAAACCGAGAAGCACTGGTGCAAGATACCAAGAGGCAGTTCGTGACATTATGCAGTTCATTGTCTTTGTTGCTGCTGGGATTGCTTCTCTTCTTATCCTCATTACAATGATAGCCTATGCAGTGATAAGGGAATTGCGTTTTGACAGAGACGACACGGCCATGTTGATGAATCTGTGTCTTTCGTTACTCGTGACAATCGTTGTTTTCGTGACTGGAGTTCGTTACGTGTCCAACAAGCTTGTTTGTCGTTCGGTGGGAGTGCTGCTGCATTACTTTGTGCTGTGTTCATTGCTGTGGATTGGATGCAGTGGAATTTGCCTTAATCGACTGATACGAACAGCCATTAAACCAGAAGAATACAATCCTGTTCTTAGATATTACATGACGAGTTGGGGCATACCCCTTATCATTTGCGGAATCACCATAGCTGGCAATGTGGAGAATTACAATGTTGAAGATTATTGTTGGCTGCGAACAAATCCATTCTACGGAGCGTTCCTTGGTCCAGCCTGTTTGATACTTTTCATTGATTTTATCATCTTTCTGCGCCTGTTTAATGCCATCAAAGGAAGTTACGATGGCGATGCCTGTTTACAGTTGAGGCCAGAAGCTGATGGGATAGAAAATGTTGCAGAGGAAAATGCATTGGTCATTCAACAGGACACTTCACCGAGTGAAGAAGACAATGTGCATTGTGCTGACAAACCCGCTTTGCCGGACAGAGTTGAAATGGAGGACCTTCTGCGTGGAAACTGTGTTTCATTGTTAGCTATCATTGTAAACGTTGCGCTTGGAGTATTTCTGATACGTTACTGGCACAATTTTGTGCTGTATATCACCTTGCAGTGTTTGTTTGCAGTGGGGCTTATTGCCTTGGGAGCGGTTGTTTTCTTCTTCTATTGTGTAAAAAAGAAGAGGATTCGGTCGCGGTGGGAAAAACTATCTTGTAAATGGCGTTGCTTTCCCGGAAAAAGCTATGAAATTCACGAAGAAATGCTTCAACCTGAAGCAACGGATGACCCTCCAGCAACTGTACCCATTGTGAATGTTGAGGTGGTGGAACAATTTACAAGCGAGGAAATTCACGGTGCCAAGAACGTGCTTTCCTTGGAAGACGGGGATTCCATATCAAACGTATCTTTGCCATCTTCAGCGGCCATAACACTCAACAAACAGGTGGTTGATCTGCCGGAAAAGGAAGTTGAAGTTCAAGTCGAAAAAGCCTCTTCTGTCTCTGATAAACATTCGTGGGCGTCAGCACCACTTCCCTTGCAATACAATCCCCGAGATAAGCTTGGCAAGAAACCCCCCGGTTATCGACACAGCTTCTCTGAAAATTTGCCTTCAACGCCAACTATTGAGGAATGTCGTAAGGCGCCGCTAGCCCCGCCAGAGGCGACTGCCAGCTCTGTTGAATCCAGTGTGCATATTCCTACAGACACAGCTTCAAATATTGCTCCTTCTGAGGGACCCTTAACCTTGCGTGACGCAGCAGACACGGGTAATGTCTCACGCAATACAAACACGTCATGTTCTGCGTCTGAGGTGTCAATACCTTTCGAACTTCCACTGACAAAAAGTAGGCCTCCTGCCCTTGGCTCGTCATCTCATGGTTCAGACGGATTACCTTCTCTCCCACTCAGGAAAACCCGTCCTAATGAAACCTTTATGCAAAATGGTCCTGCAGTGCCTAGGCCCCCAGGTATCGTTCAAGAGCTTATTGATCATTATTCAATCCCTGTTGGTGGAAACAACAGCATCCCACGCCAGATCCCCCGCGATCACGTTGTTGTTCGAGAACGGTATCATATTCCTTACGAGCCACGGGCCGTCTCCGAGAAGCCGCGCGATCACTATCAAATAGTACCTCTGTCAAAGAATTGCAGGGAACCTTACGTGCTACAGCCTGGTCATGATCAGTATGAAGATCCGCGGGATCAGTCTTTGGGATCACGCCAGGATAACCCGTACCCGATAGCAGAGCACTTTCCTATCAGAGACGAACAGAATCCAAGACAGCCAATCTATGTTAATCAAGCACCAACTCCAACTCATCCACGACCATTTGAGTATTGTCATTTTAAAACTGATACAATGCCTTCGCCAAGAGCCTATGATTTGCATCACAGTACACGTGACCAAGTATCTCCGCGATTGCATGAGTGCCAAGTACCTCACGAGCAAGGTATAAGACACGGACCAGGTGGAAGTCCATCTCCACGGCTACGTGAAGATCCTCAATTTTCTCCTGAAAACATTTGCCCAAGGTCACCGAACCCAAACGAGTCAAATCTTACACCAAGGTCACCTGATCACCACCGCGTGTCACTTGACTCTAGTACTGGTCACAGATCACATGACCAGAATCAAGATGCACCTCGCGATAACGTGGGTCGTGCTTCATGTCCCAATGAAAGACCTCATGAAAATATCTCTGCTCCCAGTGACCAGAGTTCGGTTCCAAGGGCGCATGAGCTCAATGAAAATGATTTTTCACGTGATCTAAGCCAAACTCCACGTGATCAAAATAGAGCAGGCAAAACTGCTCGCGGTCCATTTCAGAAAGTTTTGGAAAAGCCACTTGATCAGTACGCTGGAGAGGGACCACGGGACCAGCCACAAGCTTTGAATCCTGGTGAGAAGTCCACCTCTGTTAACCAGAGACCAGGTGTACCGCCTGATCAAAATGCAAGTAAATGTCAAAACGCACCCACAGCGGGAACTAGAGAACAGCCTAAGGGAATACACGTTTCACGAAGGAGGTCGCGCCGCAATCCTTATCAAATTGCTCGGGACATTCATCATAATCTTGGTATCGAAACCAGACCGAGTGACAGGCAGCAGTCGCGTCGTCAACGTCGTGTACCTCCTGCTGATCAATGTTCACAGCCTCAGAAGGCTTCTGCCAAATTACCAGTATCTAGTAACGGGGACACGCCCAAAGAGCGGACTCCTCGGTCATCCATGTCTTCCTGGAAGGAAGATCGGCCGAAAGGCGCCAAGAAAGGGCGGGCGACTGATTTGCCGAAATCTGCTGTATTGGTTCCCGTTTCTCACTTACATCGCTCCAGCCCTGAGCCGCCGCGAAATGAAACCAGCGTATAA

Transcript

chr3Alt.g6043.t1

AAGTATTTTGTCTGACAAGCATTGATTGATATGCAAATATCCATCGCCCGTCGTTGAAGCATACCCTCAGTTAGCTGGCGATCAAGCGATGCGGTGTTTACGATAATTTCAAGCGATTTAATCTCTTTAGAATTGTTCCGGAAAATGTGGTAGAAGAAGAGAATTGATGTCTCTTTTTGACATGTTTAGAAAGACTGGGCAATTTTCGTTTCTTTTTCTCCAAACGAATCGTTGACACCTCTCGCGCACAATCATGATGATCGAAATAGCTGCCACTATTAATCTCATCTTTATGACGCTTGTGTGGTTTGGATCAGGAATAGAGGCGAAAGTATCTTGTCCGCCAAGGTGTAAATGTACGCTTGTAAAAGAGGGATCTGACAGTTATGTAGTTAACTGCGCCAAGCTTGGGCTGAAGACGCTGATCAACCCAAATGATCTTCCAGAGAACGTCAATAAATTAGATCTCTCTGGAAATTATATTGAAAGAATCGGTAACTACTCCTTCAGAACCACAAATTTAACCAAAATAAAGAAACTGGATTTGTCCAGAAATGACTTACTGAAGATTGAACCAAATGCTTTTGCTGGATTAAATAAATTAACACAAATAGACCTCTCCTTTAATAAATTGTCTGTCCTTCCTGAGGGATTGTTCAGCTCACTTAATAGATTGAAAAAATTAAATCTGGAGCAAAATCCTCTGATATGTGACTGTAATTTAGAGTGGATAGTGAAGTGGCGGAAGCGCTCGAAAAGGTCCTCTGTCCGTGGGCGATGTGTATACCCTTTTGCATTAAGGGATAAGAAAATAGAACAGGTTGACAGAAATGACATGAGTTGTGAAAATCTTGAGCTGCCAGTCATGTCGCTTGGCCCACTGGGAGATGCGATTGCTTTCAAAGGGGACAGTTACAGATTTGAGTGCAAATTTAGCTGGATTCCAGACATCCAAATGATATGGTACAAGGACAGTCAACAACTTCCTTTAAATACCTCAAACAATCACAGAAGTATTTTGTTTAAGTTGGATTCCATCCAGATTGTTTGGGGGAGTACTCTGGAAATAAAAGAGCTTAGTGTGGAGGACAGTGGATTGTATGGTTGTGTTGTCACCTATCCGGGTGACTATAAGTTTACAAGAACCTCTCATCTGTCTGTTATTCCATCGGATTCCCCATTTTGCAATGCTGCTACTACTCCAACTTCTAAAGGAACATTTCATTGGCATGACACTGCAGCAGGAGGAACTGCATTCTTGCCTTGTCCCTTAGGTGTCATGGGGAGTTTTCCTGATCGTAGGGGAGCACAACGAAACTGCTCTGTCAATGGAGATTGGATGGAAGTGGAGGCAGAACCATGTGTCCATGCAAACGAAATAACCCGTGCACTTCATGACTTGAAGGAGAAAGTTGTTAATGACACAACAGTAGCATCAGTGAGTGAACAACTGCTGAACATTTCAAAGCGAGCTGCAAAATTCAGTCATCTTTTGGATGTGGTGTACACAGCTAATGTTGTGCAGAATTTGGCACAGACCATAGGAGGAAACATGACATTCAATTATAATTTGGTCAACACAATCAGTAATATCATGGAAACAGATGCAGAAATTTTGCTTGCAGCTGAGAAGAGGTCAAAGTCTTGTTCCAGCCTGGTGTTACAGCTTAATGCTTTGCATTCAAGATTTCCCCAAGACGTGCAAGCTATGTCATTTGTATCAAACAATATTGTCATCTACTTGGCCCCAATAACATCAACTGATCACAATTTAGACAAGACGTGTTTCGTGAATTCCAGCCTGCAATCAGTCTACCAAGATATTAAGTGTCAATCATGCAGTTCAGTTGAAGCTTGTGAGATGCAAATGGCTCATCTGTCTTCTATATATCTTCCATCATCACTGTTCCCGCTGACTTCAACAGACGAAAATATCAAATTTCAGTTTAGTGTTTTCTCCAATAGTAAACTTTTCCAAGAAGTGAAGGAGGGAAGTAAAAGTAAGCAGTTGGCAAAGATTACAAGCAGTGTGCTTTCACTTCAGTTTGGAGATGCAATGTTGCCAAAACCTACCCAGCCTGTGGTAATCAAATTTGAAAACCACCAGAAAGGAAAACAGCCCTTACCAGTCTACTGGGATTTCAGTTCAAATGGTGGTTTTGGTCGCTGGAAGAAGAATACAGACTGCAGTGAAGTGTTATTTGAAGGCAACCGCATTGTCACGCAGTGTTATCAGCTTTCAAACAGCAACGTCTTTGCTGTTATGATGAATGTCACCAAACCGAGAAGCACTGGTGCAAGATACCAAGAGGCAGTTCGTGACATTATGCAGTTCATTGTCTTTGTTGCTGCTGGGATTGCTTCTCTTCTTATCCTCATTACAATGATAGCCTATGCAGTGATAAGGGAATTGCGTTTTGACAGAGACGACACGGCCATGTTGATGAATCTGTGTCTTTCGTTACTCGTGACAATCGTTGTTTTCGTGACTGGAGTTCGTTACGTGTCCAACAAGCTTGTTTGTCGTTCGGTGGGAGTGCTGCTGCATTACTTTGTGCTGTGTTCATTGCTGTGGATTGGATGCAGTGGAATTTGCCTTAATCGACTGATACGAACAGCCATTAAACCAGAAGAATACAATCCTGTTCTTAGATATTACATGACGAGTTGGGGCATACCCCTTATCATTTGCGGAATCACCATAGCTGGCAATGTGGAGAATTACAATGTTGAAGATTATTGTTGGCTGCGAACAAATCCATTCTACGGAGCGTTCCTTGGTCCAGCCTGTTTGATACTTTTCATTGATTTTATCATCTTTCTGCGCCTGTTTAATGCCATCAAAGGAAGTTACGATGGCGATGCCTGTTTACAGTTGAGGCCAGAAGCTGATGGGATAGAAAATGTTGCAGAGGAAAATGCATTGGTCATTCAACAGGACACTTCACCGAGTGAAGAAGACAATGTGCATTGTGCTGACAAACCCGCTTTGCCGGACAGAGTTGAAATGGAGGACCTTCTGCGTGGAAACTGTGTTTCATTGTTAGCTATCATTGTAAACGTTGCGCTTGGAGTATTTCTGATACGTTACTGGCACAATTTTGTGCTGTATATCACCTTGCAGTGTTTGTTTGCAGTGGGGCTTATTGCCTTGGGAGCGGTTGTTTTCTTCTTCTATTGTGTAAAAAAGAAGAGGATTCGGTCGCGGTGGGAAAAACTATCTTGTAAATGGCGTTGCTTTCCCGGAAAAAGCTATGAAATTCACGAAGAAATGCTTCAACCTGAAGCAACGGATGACCCTCCAGCAACTGTACCCATTGTGAATGTTGAGGTGGTGGAACAATTTACAAGCGAGGAAATTCACGGTGCCAAGAACGTGCTTTCCTTGGAAGACGGGGATTCCATATCAAACGTATCTTTGCCATCTTCAGCGGCCATAACACTCAACAAACAGGTGGTTGATCTGCCGGAAAAGGAAGTTGAAGTTCAAGTCGAAAAAGCCTCTTCTGTCTCTGATAAACATTCGTGGGCGTCAGCACCACTTCCCTTGCAATACAATCCCCGAGATAAGCTTGGCAAGAAACCCCCCGGTTATCGACACAGCTTCTCTGAAAATTTGCCTTCAACGCCAACTATTGAGGAATGTCGTAAGGCGCCGCTAGCCCCGCCAGAGGCGACTGCCAGCTCTGTTGAATCCAGTGTGCATATTCCTACAGACACAGCTTCAAATATTGCTCCTTCTGAGGGACCCTTAACCTTGCGTGACGCAGCAGACACGGGTAATGTCTCACGCAATACAAACACGTCATGTTCTGCGTCTGAGGTGTCAATACCTTTCGAACTTCCACTGACAAAAAGTAGGCCTCCTGCCCTTGGCTCGTCATCTCATGGTTCAGACGGATTACCTTCTCTCCCACTCAGGAAAACCCGTCCTAATGAAACCTTTATGCAAAATGGTCCTGCAGTGCCTAGGCCCCCAGGTATCGTTCAAGAGCTTATTGATCATTATTCAATCCCTGTTGGTGGAAACAACAGCATCCCACGCCAGATCCCCCGCGATCACGTTGTTGTTCGAGAACGGTATCATATTCCTTACGAGCCACGGGCCGTCTCCGAGAAGCCGCGCGATCACTATCAAATAGTACCTCTGTCAAAGAATTGCAGGGAACCTTACGTGCTACAGCCTGGTCATGATCAGTATGAAGATCCGCGGGATCAGTCTTTGGGATCACGCCAGGATAACCCGTACCCGATAGCAGAGCACTTTCCTATCAGAGACGAACAGAATCCAAGACAGCCAATCTATGTTAATCAAGCACCAACTCCAACTCATCCACGACCATTTGAGTATTGTCATTTTAAAACTGATACAATGCCTTCGCCAAGAGCCTATGATTTGCATCACAGTACACGTGACCAAGTATCTCCGCGATTGCATGAGTGCCAAGTACCTCACGAGCAAGGTATAAGACACGGACCAGGTGGAAGTCCATCTCCACGGCTACGTGAAGATCCTCAATTTTCTCCTGAAAACATTTGCCCAAGGTCACCGAACCCAAACGAGTCAAATCTTACACCAAGGTCACCTGATCACCACCGCGTGTCACTTGACTCTAGTACTGGTCACAGATCACATGACCAGAATCAAGATGCACCTCGCGATAACGTGGGTCGTGCTTCATGTCCCAATGAAAGACCTCATGAAAATATCTCTGCTCCCAGTGACCAGAGTTCGGTTCCAAGGGCGCATGAGCTCAATGAAAATGATTTTTCACGTGATCTAAGCCAAACTCCACGTGATCAAAATAGAGCAGGCAAAACTGCTCGCGGTCCATTTCAGAAAGTTTTGGAAAAGCCACTTGATCAGTACGCTGGAGAGGGACCACGGGACCAGCCACAAGCTTTGAATCCTGGTGAGAAGTCCACCTCTGTTAACCAGAGACCAGGTGTACCGCCTGATCAAAATGCAAGTAAATGTCAAAACGCACCCACAGCGGGAACTAGAGAACAGCCTAAGGGAATACACGTTTCACGAAGGAGGTCGCGCCGCAATCCTTATCAAATTGCTCGGGACATTCATCATAATCTTGGTATCGAAACCAGACCGAGTGACAGGCAGCAGTCGCGTCGTCAACGTCGTGTACCTCCTGCTGATCAATGTTCACAGCCTCAGAAGGCTTCTGCCAAATTACCAGTATCTAGTAACGGGGACACGCCCAAAGAGCGGACTCCTCGGTCATCCATGTCTTCCTGGAAGGAAGATCGGCCGAAAGGCGCCAAGAAAGGGCGGGCGACTGATTTGCCGAAATCTGCTGTATTGGTTCCCGTTTCTCACTTACATCGCTCCAGCCCTGAGCCGCCGCGAAATGAAACCAGCGTATAATGCAACGCATCACTGTTAAAGAAGCAATCGACCTCTTTTAATAACACCGGGATAGAAACGCTAAGGGATTTTTAGGTAATGGATAATAGGCTCCCACTGGATGTTACTCAAAAAGAGACTTGGGATGCCAGCTCAAATGTGTTGTGCCCATTTCCAACAGGGAAAGGTAGTGCAAGAAAAATCCGTCGTACAGACTTCAGTCGATAGCTCGATACTAGGACGGAAAATTTATTGTGTTTCGCGCCTTTTCCTGTTCAGTATGCGCCGTTGCTGTCAGGCGACGCGGTTGTTCGTTTTGTAAACGGTCGTTGCCATTTGGACGACACTCAGAAAAATTGCTCACTGATATAAGTTGTCTTTTGCAAACAACGAATAAAAATCTTATTCGTTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
E7FBY6	Adhesion G protein-coupled receptor A2 OS=Danio rerio OX=7955 GN=adgra2 PE=1 SV=2
Q5IXF8	Glucagon-like peptide 2 receptor OS=Mus musculus OX=10090 GN=Glp2r PE=2 SV=2
O95838	Glucagon-like peptide 2 receptor OS=Homo sapiens OX=9606 GN=GLP2R PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13855 all species →	LRR_8	Leucine rich repeat	Repeat	Interproscan
PF07679 all species →	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF00002 all species →	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan
PF02793 all species →	HRM	Hormone receptor domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR001879 all species →	Domain	GPCR, family 2, extracellular hormone receptor domain	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR000483 all species →	Domain	Cysteine-rich flanking region, C-terminal	Interproscan
IPR017981 all species →	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR051963 all species →	Family	Adhesion G protein-coupled receptor A	Interproscan
IPR013098 all species →	Domain	Immunoglobulin I-set	Interproscan
IPR036445 all species →	Homologous_superfamily	GPCR family 2, extracellular hormone receptor domain superfamily	Interproscan
IPR046338 all species →	Homologous_superfamily	GAIN domain superfamily	Interproscan
IPR000832 all species →	Family	GPCR, family 2, secretin-like	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR003591 all species →	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45930 all species →	G-PROTEIN COUPLED RECEPTOR 124-LIKE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0004888 all species →	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0007166 all species →	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08462	ADGRA3, GPR125; adhesion G protein-coupled receptor A3	-	G protein-coupled receptors	ko04030	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of g6043.t1 across 39 RNA-seq samples of Acropora digitifera. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

39Samples

39TPM > 0

1Conditions

71.4Max TPM

51.1Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
Coral branch	39	39	51.06	71.42

Per sample · hover a bar for the full sample record

Show the sample table (39 samples)

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR23047226	Coral branch	Coral branch	adult	not recorded	SRP416931	71.42
SRR23047222	Coral branch	Coral branch	adult	not recorded	SRP416931	67.94
SRR23047210	Coral branch	Coral branch	adult	not recorded	SRP416931	62.38
SRR23047221	Coral branch	Coral branch	adult	not recorded	SRP416931	61.65
SRR23047208	Coral branch	Coral branch	adult	not recorded	SRP416931	61.31
SRR23047209	Coral branch	Coral branch	adult	not recorded	SRP416931	60.75
SRR23047223	Coral branch	Coral branch	adult	not recorded	SRP416931	60.54
SRR23047211	Coral branch	Coral branch	adult	not recorded	SRP416931	57.86
SRR23047242	Coral branch	Coral branch	adult	not recorded	SRP416931	57.72
SRR23047219	Coral branch	Coral branch	adult	not recorded	SRP416931	57.49
SRR23047239	Coral branch	Coral branch	adult	not recorded	SRP416931	57.37
SRR23047216	Coral branch	Coral branch	adult	not recorded	SRP416931	57.31
SRR23047220	Coral branch	Coral branch	adult	not recorded	SRP416931	56.04
SRR23047243	Coral branch	Coral branch	adult	not recorded	SRP416931	55.77
SRR23047213	Coral branch	Coral branch	adult	not recorded	SRP416931	55.66
SRR23047232	Coral branch	Coral branch	adult	not recorded	SRP416931	55.46
SRR23047237	Coral branch	Coral branch	adult	not recorded	SRP416931	52.74
SRR23047235	Coral branch	Coral branch	adult	not recorded	SRP416931	52.32
SRR23047207	Coral branch	Coral branch	adult	not recorded	SRP416931	50.95
SRR23047233	Coral branch	Coral branch	adult	not recorded	SRP416931	50.33
SRR23047206	Coral branch	Coral branch	adult	not recorded	SRP416931	49.23
SRR23047231	Coral branch	Coral branch	adult	not recorded	SRP416931	48.41
SRR23047224	Coral branch	Coral branch	adult	not recorded	SRP416931	48.40
SRR23047241	Coral branch	Coral branch	adult	not recorded	SRP416931	48.25
SRR23047229	Coral branch	Coral branch	adult	not recorded	SRP416931	48.15
SRR23047234	Coral branch	Coral branch	adult	not recorded	SRP416931	47.75
SRR23047214	Coral branch	Coral branch	adult	not recorded	SRP416931	46.79
SRR23047227	Coral branch	Coral branch	adult	not recorded	SRP416931	46.00
SRR23047217	Coral branch	Coral branch	adult	not recorded	SRP416931	45.82
SRR23047215	Coral branch	Coral branch	adult	not recorded	SRP416931	43.65
SRR23047218	Coral branch	Coral branch	adult	not recorded	SRP416931	42.81
SRR23047240	Coral branch	Coral branch	adult	not recorded	SRP416931	42.76
SRR23047225	Coral branch	Coral branch	adult	not recorded	SRP416931	41.28
SRR23047236	Coral branch	Coral branch	adult	not recorded	SRP416931	40.44
SRR23047228	Coral branch	Coral branch	adult	not recorded	SRP416931	39.16
SRR23047244	Coral branch	Coral branch	adult	not recorded	SRP416931	38.24
SRR23047238	Coral branch	Coral branch	adult	not recorded	SRP416931	37.81
SRR23047230	Coral branch	Coral branch	adult	not recorded	SRP416931	36.79
SRR23047212	Coral branch	Coral branch	adult	not recorded	SRP416931	36.76

Source: CnidoSite RNA-seq expression matrices (ADIGI_TPM, StringTie quantification over 39 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

Co-expression network

Genes whose expression across the transcriptome samples of Acropora digitifera tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.

Direction	Partners	Most correlated partner	PCC
Positively correlated	26	g8056.t1	0.863151593967574
Negatively correlated	17	g19588.t1	-0.734769516377262

Open this gene in Network Analysis → The network opens with the gene already entered and both directions selected. There you can add up to 9 more genes, switch between the positive and negative network, and export the edge list.

Single-cell expression

Whether this gene can be visualised in the single-cell atlases of Acropora digitifera, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.

No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.

Epigenetic marks

Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.

Peak calls overlapping this gene

Assay	Sample	Peaks	Region

No called peak overlaps this gene in 1 available assay. Either the gene is not near an accessible or marked region in those samples, or it is not represented in the peak caller’s annotation.

Browse the full epigenomic landscape of this species: DNase-seq (DHS).

What you can do with this gene

Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.

Analysis	What it does	Status
Primer design	Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed.	template found	open →
BLAST	Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start.	template found	open →
Expression heatmap	Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it.	ready	open →
Gene family / orthogroup	Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue.		open →
Gene set analysis	Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it.		open →