Detailed information of g6044.t1 in Acropora digitifera

Genomic Location: chr3Alt:11474566...11476977
NR annotation: XP_029209559.1, polycomb group RING finger protein 3-like isoform X1 [Acropora millepora]
Species abbreviation ADIGI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q28H21Polycomb group RING finger protein 1 OS=Xenopus tropicalis OX=8364 GN=pcgf1 PE=2 SV=1
Q7ZYZ7Polycomb group RING finger protein 1 OS=Danio rerio OX=7955 GN=pcgf1 PE=3 SV=1
Q4QR06Polycomb group RING finger protein 1 OS=Xenopus laevis OX=8355 GN=pcgf1 PE=2 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13923
all species →
zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan
IPR051507
all species →
FamilyPolycomb group RING fingerInterproscan
IPR017907
all species →
Conserved_siteZinc finger, RING-type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45893
all species →
POLYCOMB GROUP RING FINGER PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0035102
all species →
Cellular ComponentPRC1 complexInterproscan
GO:0036353
all species →
Biological Processobsolete histone H2A-K119 monoubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g6044.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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