Gene detail

Detailed information of g6089.t1.1 in Nemopilema nomurai

Genomic Location: :...
NR annotation: CAB3990393.1, Transposon TX1 uncharacterized 149 kDa, partial [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P14381	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1
P11369	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2
P16423	Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan
PF13966	zf-RVT	zinc-binding in reverse transcriptase	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052343	Family	Diverse Retrotransposon and Effector-Associated Protein	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR026960	Domain	Reverse transcriptase zinc-binding domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46890	NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan