Detailed information of g610.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_031559958.1, sodium/calcium exchanger NCL1-like isoform X2 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6K3R5Sodium/calcium exchanger NCL2 OS=Oryza sativa subsp. japonica OX=39947 GN=NCL2 PE=2 SV=2
Q5QNI2Sodium/calcium exchanger NCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=NCL1 PE=2 SV=1
Q8L636Sodium/calcium exchanger NCL OS=Arabidopsis thaliana OX=3702 GN=NCL PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03662Glyco_hydro_79nGlycosyl hydrolase family 79, N-terminal domain DomainInterproscan
PF15369KIAA1328Uncharacterised protein KIAA1328FamilyInterproscan
PF14934TMEM254Transmembrane protein 254FamilyInterproscan
PF09588YqaJYqaJ-like viral recombinase domainDomainInterproscan
PF01699Na_Ca_exSodium/calcium exchanger proteinFamilyInterproscan
PF09724Dcc1Sister chromatid cohesion protein Dcc1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005199FamilyGlycoside hydrolase, family 79Interproscan
IPR017853Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR032736FamilyProtein hinderinInterproscan
IPR028110FamilyTransmembrane protein 254Interproscan
IPR019080DomainYqaJ viral recombinaseInterproscan
IPR011604Homologous_superfamilyPD-(D/E)XK endonuclease-like domain superfamilyInterproscan
IPR011335Homologous_superfamilyRestriction endonuclease type II-likeInterproscan
IPR004713FamilyCalcium/proton exchangerInterproscan
IPR004837DomainSodium/calcium exchanger membrane regionInterproscan
IPR019128FamilySister chromatid cohesion protein Dcc1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46145HEPARANASEInterproscan
PTHR28375PROTEIN HINDERINInterproscan
PTHR34104TRANSMEMBRANE PROTEIN 254Interproscan
PTHR39953RE54151PInterproscan
PTHR31503VACUOLAR CALCIUM ION TRANSPORTERInterproscan
PTHR13395SISTER CHROMATID COHESION PROTEIN DCC1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016798Molecular Functionhydrolase activity, acting on glycosyl bondsInterproscan
GO:0006812Biological Processmonoatomic cation transportInterproscan
GO:0006874Biological Processintracellular calcium ion homeostasisInterproscan
GO:0008324Molecular Functionmonoatomic cation transmembrane transporter activityInterproscan
GO:0015369Molecular Functioncalcium:proton antiporter activityInterproscan
GO:0070588Biological Processcalcium ion transmembrane transportInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0000775Cellular Componentchromosome, centromeric regionInterproscan
GO:0000785Cellular ComponentchromatinInterproscan
GO:0007064Biological Processmitotic sister chromatid cohesionInterproscan
GO:0031390Cellular ComponentCtf18 RFC-like complexInterproscan
GO:0034088Biological Processmaintenance of mitotic sister chromatid cohesionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07964HPSE; heparanaseEC:3.2.1.166
Glycosaminoglycan binding proteinsko00536deepkoala

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