Detailed information of g611.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3159872.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A7RIT93-hydroxyanthranilate 3,4-dioxygenase OS=Nematostella vectensis OX=45351 GN=v1g178517 PE=3 SV=1
P469523-hydroxyanthranilate 3,4-dioxygenase OS=Homo sapiens OX=9606 GN=HAAO PE=1 SV=2
P469533-hydroxyanthranilate 3,4-dioxygenase OS=Rattus norvegicus OX=10116 GN=Haao PE=1 SV=2
Gene familySubfamily
Transcription Factors Familyzf-C2H2
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DDB1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04055Radical_SAMRadical SAM superfamilyDomainInterproscan
PF05253zf-U11-48KU11-48K-like CHHC zinc fingerDomainInterproscan
PF00035dsrmDouble-stranded RNA binding motifDomainInterproscan
PF060523-HAO3-hydroxyanthranilic acid dioxygenaseDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF07500TFIIS_MTranscription factor S-II (TFIIS), central domainDomainInterproscan
PF07744SPOCSPOC domainDomainInterproscan
PF10270MMgTMembrane magnesium transporterFamilyInterproscan
PF01849NACNAC domainFamilyInterproscan
PF00152tRNA-synt_2tRNA synthetases class II (D, K and N) DomainInterproscan
PF03178CPSF_ACPSF A subunit regionRepeatInterproscan
PF10433MMS1_NMono-functional DNA-alkylating methyl methanesulfonate N-termRepeatInterproscan
PF21549PRDM2_PRPR domain zinc finger protein 2, PR domainDomainInterproscan
PF13912zf-C2H2_6C2H2-type zinc fingerDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007197DomainRadical SAMInterproscan
IPR039661FamilyELP3/YhcCInterproscan
IPR006638DomainElp3/MiaA/NifB-like, radical SAM core domainInterproscan
IPR022776DomainTRM13/UPF0224 family, U11-48K-like CHHC zinc finger domainInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR014720DomainDouble-stranded RNA-binding domainInterproscan
IPR051591FamilyUPF0224 (FAM112) RNA ProcessingInterproscan
IPR014710Homologous_superfamilyRmlC-like jelly roll foldInterproscan
IPR010329Family3-hydroxyanthranilic acid dioxygenaseInterproscan
IPR011051Homologous_superfamilyRmlC-like cupin domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR051510FamilySuperkiller complex protein 8Interproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR003618DomainTranscription elongation factor S-II, central domainInterproscan
IPR036575Homologous_superfamilyTranscription elongation factor S-II, central domain superfamilyInterproscan
IPR012921DomainSpen paralogue and orthologue SPOC, C-terminalInterproscan
IPR018937FamilyMembrane magnesium transporterInterproscan
IPR002715DomainNascent polypeptide-associated complex NAC domainInterproscan
IPR038187Homologous_superfamilyNAC A/B domain superfamilyInterproscan
IPR039370FamilyTranscription factor BTF3Interproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR004364DomainAminoacyl-tRNA synthetase, class II (D/K/N)Interproscan
IPR004871DomainCleavage/polyadenylation specificity factor, A subunit, C-terminalInterproscan
IPR050358FamilyRSE1/DDB1/CFT1/CPSF1Interproscan
IPR018846DomainCleavage/polyadenylation specificity factor, A subunit, N-terminalInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR001214DomainSET domainInterproscan
IPR044417DomainPRDM7/PRDM9, PR/SET domainInterproscan
IPR006585DomainFucolectin tachylectin-4 pentraxin-1Interproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR051941FamilyBlood Group Antigen-Binding LectinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11135HISTONE ACETYLTRANSFERASE-RELATEDInterproscan
PTHR21402UNCHARACTERIZEDInterproscan
PTHR154973-HYDROXYANTHRANILATE 3,4-DIOXYGENASEInterproscan
PTHR44090WD REPEAT-CONTAINING PROTEIN 61Interproscan
PTHR11477TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEINInterproscan
PTHR10351TRANSCRIPTION FACTOR BTF3 FAMILY MEMBERInterproscan
PTHR22594ASPARTYL/LYSYL-TRNA SYNTHETASEInterproscan
PTHR10644DNA REPAIR/RNA PROCESSING CPSF FAMILYInterproscan
PTHR24408ZINC FINGER PROTEINInterproscan
PTHR45713FTP DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0051536Molecular Functioniron-sulfur cluster bindingInterproscan
GO:0002926Biological ProcesstRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0033588Cellular Componentelongator holoenzyme complexInterproscan
GO:0000334Molecular Function3-hydroxyanthranilate 3,4-dioxygenase activityInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0034354Biological Process'de novo' NAD biosynthetic process from tryptophanInterproscan
GO:0046874Biological Processquinolinate metabolic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016593Cellular ComponentCdc73/Paf1 complexInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0005854Cellular Componentnascent polypeptide-associated complexInterproscan
GO:0042788Cellular Componentobsolete polysomal ribosomeInterproscan
GO:0004816Molecular Functionasparagine-tRNA ligase activityInterproscan
GO:0006421Biological Processasparaginyl-tRNA aminoacylationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005686Cellular ComponentU2 snRNPInterproscan
GO:0030620Molecular FunctionU2 snRNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0042054Molecular Functionhistone methyltransferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12602WDR61, REC14, SKI8; WD repeat-containing protein 61-Apoptosis - flyko04214deepkoala
Membrane traffickingko04131deepkoala
Messenger RNA biogenesisko03019deepkoala

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