Detailed information of g613.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAB3980855.1, bifunctional polynucleotide phosphatase kinase isoform X2 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9JLV6Bifunctional polynucleotide phosphatase/kinase OS=Mus musculus OX=10090 GN=Pnkp PE=1 SV=2
Q96T60Bifunctional polynucleotide phosphatase/kinase OS=Homo sapiens OX=9606 GN=PNKP PE=1 SV=1
Q19683Uncharacterized protein F21D5.5 OS=Caenorhabditis elegans OX=6239 GN=F21D5.5 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07662Nucleos_tra2_CNa+ dependent nucleoside transporter C-terminusFamilyInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF17913FHA_2FHA domainDomainInterproscan
PF13671AAA_33AAA domainDomainInterproscan
PF08645PNK3PPolynucleotide kinase 3 phosphataseFamilyInterproscan
PF06094GGACTGamma-glutamyl cyclotransferase, AIG2-likeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR008276FamilyConcentrative nucleoside transporterInterproscan
IPR011657DomainConcentrative nucleoside transporter C-terminal domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR052510FamilyOomycete RxLR EffectorInterproscan
IPR026201FamilyCentrosomal protein of 290kDaInterproscan
IPR036412Homologous_superfamilyHAD-like superfamilyInterproscan
IPR006551DomainPolynucleotide 3'-phosphataseInterproscan
IPR023214Homologous_superfamilyHAD superfamilyInterproscan
IPR041388DomainPNK, FHA domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR013954FamilyPolynucleotide kinase 3 phosphataseInterproscan
IPR006549DomainHAD-superfamily hydrolase,subfamily IIIAInterproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR013024DomainGamma-glutamyl cyclotransferase-likeInterproscan
IPR017939FamilyGamma-glutamylcyclotransferaseInterproscan
IPR009288DomainGamma-glutamylcyclotransferase, AIG2-like domainInterproscan
IPR036568Homologous_superfamilyGamma-glutamyl cyclotransferase-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46331VALACYCLOVIR HYDROLASEInterproscan
PTHR10590SODIUM/NUCLEOSIDE COTRANSPORTERInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR45895INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR18879CENTROSOMAL PROTEIN OF 290 KDAInterproscan
PTHR12083BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASEInterproscan
PTHR12935UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0017171Molecular Functionserine hydrolase activityInterproscan
GO:0005337Molecular Functionnucleoside transmembrane transporter activityInterproscan
GO:0005415Molecular Functionnucleoside:sodium symporter activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0015293Molecular Functionsymporter activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:1901642Biological Processnucleoside transmembrane transportInterproscan
GO:0034451Cellular Componentcentriolar satelliteInterproscan
GO:0035869Cellular Componentciliary transition zoneInterproscan
GO:0097711Biological Processciliary basal body-plasma membrane dockingInterproscan
GO:1905349Biological Processciliary transition zone assemblyInterproscan
GO:1905515Biological Processnon-motile cilium assemblyInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0046403Molecular Functionpolynucleotide 3'-phosphatase activityInterproscan
GO:0046404Molecular FunctionATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activityInterproscan
GO:0046939Biological Processobsolete nucleotide phosphorylationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003839Molecular Functiongamma-glutamylcyclotransferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08073PNKP; bifunctional polynucleotide phosphatase/kinaseEC:3.1.3.32
EC:2.7.1.78
DNA repair and recombination proteinsko03400deepkoala

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