Gene detail

Detailed information of g615.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: CAH3043482.1, unnamed protein product [Pocillopora meandrina]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9VMU8	UDP-galactose transporter senju OS=Drosophila melanogaster OX=7227 GN=senju PE=1 SV=2
O08520	CMP-sialic acid transporter OS=Cricetulus griseus OX=10029 GN=SLC35A1 PE=2 SV=1
Q654D9	CMP-sialic acid transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CSTLP1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000027 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0000042 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0000175 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0000704 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0001838 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0006216 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0008333 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0017061 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0028130 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0033028 (this species only) · gene tree & orthology
Transcription factor family	ETS · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02990 all species →	EMP70	Endomembrane protein 70	Family	Interproscan
PF00178 all species →	Ets	Ets-domain	Domain	Interproscan
PF14223 all species →	Retrotran_gag_2	gag-polypeptide of LTR copia-type	Family	Interproscan
PF04142 all species →	Nuc_sug_transp	Nucleotide-sugar transporter	Family	Interproscan
PF00005 all species →	ABC_tran	ABC transporter	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004240 all species →	Family	Nonaspanin (TM9SF)	Interproscan
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR000418 all species →	Domain	Ets domain	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR046328 all species →	Family	ETS family	Interproscan
IPR007271 all species →	Family	Nucleotide-sugar transporter	Interproscan
IPR037730 all species →	Family	Mitochondrial inner membrane protease subunit 2	Interproscan
IPR036286 all species →	Homologous_superfamily	LexA/Signal peptidase-like superfamily	Interproscan
IPR017871 all species →	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003439 all species →	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR050173 all species →	Family	ATP-binding cassette transporter C	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10766 all species →	TRANSMEMBRANE 9 SUPERFAMILY PROTEIN	Interproscan
PTHR11849 all species →	ETS	Interproscan
PTHR47481 all species →	-	Interproscan
PTHR10231 all species →	NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER	Interproscan
PTHR46041 all species →	MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2	Interproscan
PTHR24223 all species →	ATP-BINDING CASSETTE SUB-FAMILY C	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0072657 all species →	Biological Process	protein localization to membrane	Interproscan
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0043565 all species →	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0030154 all species →	Biological Process	cell differentiation	Interproscan
GO:0000139 all species →	Cellular Component	Golgi membrane	Interproscan
GO:0005459 all species →	Molecular Function	UDP-galactose transmembrane transporter activity	Interproscan
GO:0015165 all species →	Molecular Function	pyrimidine nucleotide-sugar transmembrane transporter activity	Interproscan
GO:0030173 all species →	Cellular Component	obsolete integral component of Golgi membrane	Interproscan
GO:0090481 all species →	Biological Process	pyrimidine nucleotide-sugar transmembrane transport	Interproscan
GO:0004175 all species →	Molecular Function	endopeptidase activity	Interproscan
GO:0006465 all species →	Biological Process	signal peptide processing	Interproscan
GO:0006627 all species →	Biological Process	protein processing involved in protein targeting to mitochondrion	Interproscan
GO:0008236 all species →	Molecular Function	serine-type peptidase activity	Interproscan
GO:0042720 all species →	Cellular Component	mitochondrial inner membrane peptidase complex	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0042626 all species →	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g615.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.