Detailed information of g619.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: PIK54276.1, endonuclease-reverse transcriptase [Apostichopus japonicus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P16423Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P08548LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1
Q03278Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Nasonia vitripennis OX=7425 PE=4 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF00106adh_shortshort chain dehydrogenaseDomainInterproscan
PF12157DUF3591Protein of unknown function (DUF3591)FamilyInterproscan
PF15288zf-CCHC_6Zinc knuckleDomainInterproscan
PF00439BromodomainBromodomainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF05970PIF1PIF1-like helicaseFamilyInterproscan
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR002347FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR053241FamilyNADPH-dependent pterin aldehyde reductaseInterproscan
IPR020904Conserved_siteShort-chain dehydrogenase/reductase, conserved siteInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR001487DomainBromodomainInterproscan
IPR022591DomainTranscription initiation factor TFIID subunit 1, histone acetyltransferase domainInterproscan
IPR041670DomainZinc knuckleInterproscan
IPR036427Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR040240FamilyTranscription initiation factor TFIID subunit 1Interproscan
IPR018359Conserved_siteBromodomain, conserved siteInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR010285FamilyDNA helicase Pif1-likeInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR050350FamilyComplement & Cell Adhesion RegulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22750G-PROTEIN COUPLED RECEPTORInterproscan
PTHR45267-Interproscan
PTHR13900TRANSCRIPTION INITIATION FACTOR TFIIDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24246OLFACTORY RECEPTOR AND ADENOSINE RECEPTORInterproscan
PTHR19325COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007189Biological Processadenylate cyclase-activating G protein-coupled receptor signaling pathwayInterproscan
GO:0019222Biological Processregulation of metabolic processInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0016616Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004402Molecular Functionhistone acetyltransferase activityInterproscan
GO:0005669Cellular Componenttranscription factor TFIID complexInterproscan
GO:0006366Biological Processtranscription by RNA polymerase IIInterproscan
GO:0016251Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan
GO:0017025Molecular FunctionTBP-class protein bindingInterproscan
GO:0051123Biological ProcessRNA polymerase II preinitiation complex assemblyInterproscan
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan

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