Gene detail

Detailed information of g622.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_020625935.1, CREB-regulated transcription coactivator 1-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q52KS4	CREB-regulated transcription coactivator 3 OS=Xenopus laevis OX=8355 GN=crtc3 PE=2 SV=2
Q0IHT3	CREB-regulated transcription coactivator 3 OS=Xenopus tropicalis OX=8364 GN=crtc3 PE=2 SV=1
Q6UUV9	CREB-regulated transcription coactivator 1 OS=Homo sapiens OX=9606 GN=CRTC1 PE=1 SV=2

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02373	JmjC	JmjC domain, hydroxylase	Domain	Interproscan
PF12884	TORC_N	Transducer of regulated CREB activity, N terminus	Family	Interproscan
PF12886	TORC_C	Transducer of regulated CREB activity, C terminus	Family	Interproscan
PF13650	Asp_protease_2	Aspartyl protease	Domain	Interproscan
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003347	Domain	JmjC domain	Interproscan
IPR050910	Family	JMJD6 family arginine demethylases/lysyl-hydroxylases	Interproscan
IPR006578	Domain	MADF domain	Interproscan
IPR024783	Domain	Transducer of regulated CREB activity, N-terminal	Interproscan
IPR024785	Domain	Transducer of regulated CREB activity, C-terminal	Interproscan
IPR024786	Family	CREB-regulated transcription coactivator	Interproscan
IPR027468	Homologous_superfamily	Alpha-dystroglycan domain 2	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12480	ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD	Interproscan
PTHR13589	CREB-REGULATED TRANSCRIPTION COACTIVATOR	Interproscan
PTHR22955	RETROTRANSPOSON	Interproscan
PTHR45793	HOMEOBOX PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006909	Biological Process	phagocytosis	Interproscan
GO:0033749	Molecular Function	histone H4R3 demethylase activity	Interproscan
GO:0106140	Molecular Function	P-TEFb complex binding	Interproscan
GO:0008140	Molecular Function	cAMP response element binding protein binding	Interproscan
GO:0051289	Biological Process	protein homotetramerization	Interproscan
GO:0032793	Biological Process	positive regulation of CREB transcription factor activity	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02561	BOK; Bcl-2-related ovarian killer protein	-	Mitochondrial biogenesis	ko03029	deepkoala
			Chromosome and associated proteins	ko03036	deepkoala
			Apoptosis - multiple species	ko04215	deepkoala