Detailed information of g623.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_012558107.2, probable methyltransferase TARBP1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
E9Q368tRNA (guanosine(18)-2'-O)-methyltransferase TARBP1 OS=Mus musculus OX=10090 GN=Tarbp1 PE=1 SV=1
Q13395tRNA (guanosine(18)-2'-O)-methyltransferase TARBP1 OS=Homo sapiens OX=9606 GN=TARBP1 PE=1 SV=1
Q07527tRNA (guanosine(18)-2'-O)-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRM3 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD
Ubiquitin FamilyDUB|ULP|ULP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628PHDPHD-fingerDomainInterproscan
PF00588SpoU_methylaseSpoU rRNA Methylase familyFamilyInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR003653DomainUlp1 protease family, C-terminal catalytic domainInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR045330FamilyProbable methyltransferase Trm3/TARBP1Interproscan
IPR029026Homologous_superfamilytRNA (guanine-N1-)-methyltransferase, N-terminalInterproscan
IPR001537DomaintRNA/rRNA methyltransferase, SpoU typeInterproscan
IPR044748DomainTrm3/ TARBP1, C-terminalInterproscan
IPR029028Homologous_superfamilyAlpha/beta knot methyltransferasesInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR008042FamilyRetrotransposon, PaoInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR34718PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR12029RNA METHYLTRANSFERASEInterproscan
PTHR22955RETROTRANSPOSONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan
GO:0016423Molecular FunctiontRNA (guanine) methyltransferase activityInterproscan
GO:0030488Biological ProcesstRNA methylationInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0008173Molecular FunctionRNA methyltransferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15333TRM3, TARBP1; tRNA guanosine-2'-O-methyltransferaseEC:2.1.1.34
Chromosome and associated proteinsko03036deepkoala

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