Detailed information of g6247.t1 in Acropora digitifera

Genomic Location: chr3Alt:15882509...15893583
NR annotation: XP_044167292.1, protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9FGH2Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 OS=Arabidopsis thaliana OX=3702 GN=LSH5 PE=1 SV=1
Q9LMK2Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana OX=3702 GN=LSH6 PE=1 SV=1
A2Y3I2Protein G1-like9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19565 PE=3 SV=1
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04852
all species →		ALOG_domALOG domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006936
all species →		DomainALOG domainInterproscan
IPR040222
all species →		FamilyALOG familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31165
all species →		PROTEIN G1-LIKE2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0009299
all species →		Biological ProcessmRNA transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g6247.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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