Detailed information of g6309.t1 in Acropora digitifera

Genomic Location: chr3Alt:16524992...16527895
NR annotation: CAH3166307.1, unnamed protein product [Pocillopora meandrina]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O00370LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03372
all species →		Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036691
all species →		Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135
all species →		DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR004244
all species →		FamilyTransposase, L1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11505
all species →		L1 TRANSPOSABLE ELEMENT-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0003727
all species →		Molecular Functionsingle-stranded RNA bindingInterproscan
GO:0032197
all species →		Biological ProcessretrotranspositionInterproscan
GO:1990904
all species →		Cellular Componentribonucleoprotein complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g6309.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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