Detailed information of g632.t1 in Montipora capitata

Genomic Location: Sc0000006:617060...623868
NR annotation: XP_029211292.2, pre-mRNA-splicing factor CWC25 homolog [Acropora millepora]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9DBF7Pre-mRNA-splicing factor CWC25 homolog OS=Mus musculus OX=10090 GN=Cwc25 PE=2 SV=2
Q9NXE8Pre-mRNA-splicing factor CWC25 homolog OS=Homo sapiens OX=9606 GN=CWC25 PE=1 SV=1
P0CM99Pre-mRNA-splicing factor CWC25 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=CWC25 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007061 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10197
all species →
Cir_NN-terminal domain of CBF1 interacting co-repressor CIRDomainInterproscan
PF12542
all species →
CWC25Pre-mRNA splicing factorFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019339
all species →
DomainCBF1-interacting co-repressor CIR, N-terminal domainInterproscan
IPR051376
all species →
FamilyPre-mRNA-splicing factor CWC25Interproscan
IPR022209
all species →
FamilyPre-mRNA splicing factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16196
all species →
CELL CYCLE CONTROL PROTEIN CWF25Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000398
all species →
Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005684
all species →
Cellular ComponentU2-type spliceosomal complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g632.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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