Detailed information of g634.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_029204925.2, putative ammonium transporter 3 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q21565Putative ammonium transporter 3 OS=Caenorhabditis elegans OX=6239 GN=amt-3 PE=3 SV=2
Q20605Putative ammonium transporter 2 OS=Caenorhabditis elegans OX=6239 GN=amt-2 PE=3 SV=3
Q8MXY0Ammonium transporter 3 OS=Dictyostelium discoideum OX=44689 GN=amtC PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00909Ammonium_transpAmmonium Transporter FamilyFamilyInterproscan
PF01193RNA_pol_LRNA polymerase Rpb3/Rpb11 dimerisation domainDomainInterproscan
PF00054Laminin_G_1Laminin G domainDomainInterproscan
PF02210Laminin_G_2Laminin G domainDomainInterproscan
PF00069PkinaseProtein kinase domainDomainInterproscan
PF12605CK1gamma_CCasein kinase 1 gamma C terminalFamilyInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF00024PAN_1PAN domainDomainInterproscan
PF01057Parvo_NS1Parvovirus non-structural protein NS1DomainInterproscan
PF00687Ribosomal_L1Ribosomal protein L1p/L10e familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029020Homologous_superfamilyAmmonium/urea transporterInterproscan
IPR024041DomainAmmonium transporter AmtB-like domainInterproscan
IPR010920Homologous_superfamilyLSM domain superfamilyInterproscan
IPR034109DomainSm-like protein Lsm11, middle domainInterproscan
IPR039267FamilyU7 snRNA-associated Sm-like protein Lsm11Interproscan
IPR050518FamilyArchaeal Rpo3/Eukaryotic RPB3 RNA Polymerase SubunitInterproscan
IPR011263DomainDNA-directed RNA polymerase, RpoA/D/Rpb3-typeInterproscan
IPR036603Homologous_superfamilyRNA polymerase, RBP11-like subunitInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR050372FamilyNeurexin-related cell adhesion and synaptic proteinInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR050235FamilyCasein Kinase 1 Ser/Thr Protein KinaseInterproscan
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR022247DomainCasein kinase 1 gamma C-terminalInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR050283FamilyE-box Binding Transcriptional RegulatorsInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001257DomainParvovirus non-structural protein 1, helicase domainInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR028364FamilyRibosomal protein uL1/ribosomal biogenesis proteinInterproscan
IPR023674Homologous_superfamilyRibosomal protein uL1-likeInterproscan
IPR050757FamilyCollagen-modifying Glycosyltransferase 25Interproscan
IPR002654FamilyGlycosyl transferase, family 25Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11730AMMONIUM TRANSPORTERInterproscan
PTHR21415U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM11Interproscan
PTHR11800DNA-DIRECTED RNA POLYMERASEInterproscan
PTHR15036PIKACHURIN-LIKE PROTEINInterproscan
PTHR11909CASEIN KINASE-RELATEDInterproscan
PTHR23349BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWISTInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR3642754S RIBOSOMAL PROTEIN L1, MITOCHONDRIALInterproscan
PTHR10730PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008519Molecular Functionammonium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0072488Biological Processammonium transmembrane transportInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0097272Biological Processammonium homeostasisInterproscan
GO:0005683Cellular ComponentU7 snRNPInterproscan
GO:0006398Biological ProcessmRNA 3'-end processing by stem-loop binding and cleavageInterproscan
GO:0071209Molecular FunctionU7 snRNA bindingInterproscan
GO:0001054Molecular FunctionRNA polymerase I activityInterproscan
GO:0001056Molecular FunctionRNA polymerase III activityInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0005666Cellular ComponentRNA polymerase III complexInterproscan
GO:0005736Cellular ComponentRNA polymerase I complexInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006897Biological ProcessendocytosisInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0018105Biological Processpeptidyl-serine phosphorylationInterproscan
GO:0090263Biological Processpositive regulation of canonical Wnt signaling pathwayInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0032502Biological Processdevelopmental processInterproscan
GO:0019079Biological Processviral genome replicationInterproscan
GO:0050211Molecular Functionprocollagen galactosyltransferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02218CSNK1, CKI; casein kinase 1EC:2.7.11.1
Transportersko02000deepkoala
Messenger RNA biogenesisko03019deepkoala
Protein kinasesko01001deepkoala

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