Gene detail

Detailed information of g6380.t2 in Tripedalia maipoensis

Genomic Location: scaffold_3:9901792...9914886
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00020 all species →	TNFR_c6	TNFR/NGFR cysteine-rich region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001368 all species →	Domain	TNFR/NGFR cysteine-rich region	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46874 all species →	TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 6	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005031 all species →	Molecular Function	tumor necrosis factor receptor activity	Interproscan
GO:0006924 all species →	Biological Process	activation-induced cell death of T cells	Interproscan
GO:0009897 all species →	Cellular Component	external side of plasma membrane	Interproscan
GO:0031265 all species →	Cellular Component	CD95 death-inducing signaling complex	Interproscan
GO:0032872 all species →	Biological Process	regulation of stress-activated MAPK cascade	Interproscan
GO:0043066 all species →	Biological Process	negative regulation of apoptotic process	Interproscan
GO:0045121 all species →	Cellular Component	membrane raft	Interproscan
GO:0097049 all species →	Biological Process	motor neuron apoptotic process	Interproscan
GO:0097192 all species →	Biological Process	extrinsic apoptotic signaling pathway in absence of ligand	Interproscan
GO:0097527 all species →	Biological Process	necroptotic signaling pathway	Interproscan
GO:2001269 all species →	Biological Process	obsolete positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05161	TNFRSF26; tumor necrosis factor receptor superfamily member 26	-	Cytokine receptors	ko04050	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.