Detailed information of g639.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047123160.1, TBC1 domain family member 22B [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NU19TBC1 domain family member 22B OS=Homo sapiens OX=9606 GN=TBC1D22B PE=1 SV=3
Q95LL3TBC1 domain family member 22B OS=Macaca fascicularis OX=9541 GN=TBC1D22B PE=2 SV=1
Q8WUA7TBC1 domain family member 22A OS=Homo sapiens OX=9606 GN=TBC1D22A PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00566RabGAP-TBCRab-GTPase-TBC domainFamilyInterproscan
PF07904Eaf7Chromatin modification-related protein EAF7FamilyInterproscan
PF12205GIT1_CG protein-coupled receptor kinase-interacting protein 1 C termDomainInterproscan
PF16559GIT_CCGIT coiled-coil Rho guanine nucleotide exchange factorCoiled-coilInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF04218CENP-B_NCENP-B N-terminal DNA-binding domainDomainInterproscan
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000195DomainRab-GAP-TBC domainInterproscan
IPR035969Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan
IPR012423FamilyChromatin modification-related protein Eaf7/MRGBPInterproscan
IPR002490FamilyV-type ATPase, V0 complex, 116kDa subunit familyInterproscan
IPR022018DomainARF GTPase-activating protein GIT1, C-terminalInterproscan
IPR047161FamilyARF GTPase-activating protein Git-likeInterproscan
IPR032352DomainArf GTPase-activating protein GIT1/2, coiled-coil domainInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR007889DomainDNA binding HTH domain, Psq-typeInterproscan
IPR034584FamilySperm microtubule inner protein 8Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINInterproscan
PTHR13581MRG-BINDING PROTEINInterproscan
PTHR11629VACUOLAR PROTON ATPASESInterproscan
PTHR46097G PROTEIN-COUPLED RECEPTOR KINASE INTERACTING ARFGAPInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR19303TRANSPOSONInterproscan
PTHR35348TESTIS, PROSTATE AND PLACENTA-EXPRESSED PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0090630Biological Processactivation of GTPase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043189Cellular ComponentH4/H2A histone acetyltransferase complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016573Biological Processobsolete histone acetylationInterproscan
GO:0035267Cellular ComponentNuA4 histone acetyltransferase complexInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007035Biological Processvacuolar acidificationInterproscan
GO:0016471Cellular Componentvacuolar proton-transporting V-type ATPase complexInterproscan
GO:0033179Cellular Componentproton-transporting V-type ATPase, V0 domainInterproscan
GO:0046961Molecular Functionproton-transporting ATPase activity, rotational mechanismInterproscan
GO:0051117Molecular FunctionATPase bindingInterproscan
GO:1902600Biological Processproton transmembrane transportInterproscan
GO:0007420Biological Processbrain developmentInterproscan
GO:0008277Biological Processregulation of G protein-coupled receptor signaling pathwayInterproscan
GO:0031267Molecular Functionsmall GTPase bindingInterproscan
GO:0032012Biological Processregulation of ARF protein signal transductionInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11343MRGBP; MRG-binding protein-Membrane traffickingko04131deepkoala
Chromosome and associated proteinsko03036deepkoala

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