Detailed information of g64.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_227368013.1, UDP-3-O-acyl-N-acetylglucosamine deacetylase [Halomonas sp. M20]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1D2K0UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Myxococcus xanthus (strain DK1622) OX=246197 GN=lpxC PE=3 SV=1
Q5R0M7UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) OX=283942 GN=lpxC PE=3 SV=1
Q12SC1UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) OX=318161 GN=lpxC PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00498FHAFHA domainFamilyInterproscan
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF02932Neur_chan_membNeurotransmitter-gated ion-channel transmembrane regionFamilyInterproscan
PF09229Aha1_NActivator of Hsp90 ATPase, N-terminalDomainInterproscan
PF13895Ig_2Immunoglobulin domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03331LpxCUDP-3-O-acyl N-acetylglycosamine deacetylaseFamilyInterproscan
PF00691OmpAOmpA familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000253DomainForkhead-associated (FHA) domainInterproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR052642FamilyCoiled-coil and Forkhead-associated domain-containing proteinInterproscan
IPR018000Conserved_siteNeurotransmitter-gated ion-channel, conserved siteInterproscan
IPR006028FamilyGamma-aminobutyric acid A receptor/Glycine receptor alphaInterproscan
IPR036719Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR006029DomainNeurotransmitter-gated ion-channel transmembrane domainInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan
IPR015310DomainActivator of Hsp90 ATPase AHSA1-like, N-terminalInterproscan
IPR036338Homologous_superfamilyActivator of Hsp90 ATPase, Aha1Interproscan
IPR050577FamilyCytochrome b5/MAPR and VMP1 familiesInterproscan
IPR052598FamilyImmunoglobulin superfamily CEA-relatedInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036737Homologous_superfamilyOmpA-like domain superfamilyInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR015870Homologous_superfamilyUDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminalInterproscan
IPR004463FamilyUDP-3-O-acyl N-acetylglucosamine deacetylaseInterproscan
IPR006665DomainOmpA-like domainInterproscan
IPR011334Homologous_superfamilyUDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminalInterproscan
IPR006664DomainOuter membrane protein, bacterialInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18853FORKHEAD-ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATEDInterproscan
PTHR18945NEUROTRANSMITTER GATED ION CHANNELInterproscan
PTHR10281MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATEDInterproscan
PTHR44337CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33694UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0005231Molecular Functionexcitatory extracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0005254Molecular Functionchloride channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0050877Biological Processnervous system processInterproscan
GO:1902476Biological Processchloride transmembrane transportInterproscan
GO:1904315Molecular Functiontransmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potentialInterproscan
GO:0001671Molecular FunctionATPase activator activityInterproscan
GO:0051087Molecular Functionprotein-folding chaperone bindingInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0006914Biological ProcessautophagyInterproscan
GO:0007030Biological ProcessGolgi organizationInterproscan
GO:0012505Cellular Componentendomembrane systemInterproscan
GO:0008759Molecular Functionobsolete UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activityInterproscan
GO:0009245Biological Processlipid A biosynthetic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K21248VMP1; vacuole membrane protein 1-Chromosome and associated proteinsko03036deepkoala
Autophagy - animalko04140deepkoala

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