Gene detail

Detailed information of g6426.t1.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: KAJ7394697.1, hypothetical protein OS493_000522 [Desmophyllum pertusum]
Species abbreviation MCACT · all data for this species · gene families

Sequence

No sequence record for g6426.t1.1 in MCACT (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O54788	DNA fragmentation factor subunit beta OS=Mus musculus OX=10090 GN=Dffb PE=1 SV=1
Q99N34	DNA fragmentation factor subunit beta OS=Rattus norvegicus OX=10116 GN=Dffb PE=1 SV=1
Q58CZ0	DNA fragmentation factor subunit beta OS=Bos taurus OX=9913 GN=DFFB PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005928 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02017 all species →	CIDE-N	CIDE-N domain	Domain	Interproscan
PF09230 all species →	DFF40	DNA fragmentation factor 40 kDa	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003508 all species →	Domain	CIDE-N domain	Interproscan
IPR039729 all species →	Family	DNA fragmentation factor 40	Interproscan
IPR015311 all species →	Domain	DNA fragmentation factor 40, C-terminal	Interproscan
IPR044925 all species →	Homologous_superfamily	His-Me finger superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13067 all species →	CASPASE-ACTIVATED DNASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006915 all species →	Biological Process	apoptotic process	Interproscan
GO:0004520 all species →	Molecular Function	DNA endonuclease activity	Interproscan
GO:0004536 all species →	Molecular Function	DNA nuclease activity	Interproscan
GO:0006309 all species →	Biological Process	apoptotic DNA fragmentation	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02311	DFFB, DFF40; DNA fragmentation factor, 40 kD, beta subunit	EC:3.-.-.-	Apoptosis	ko04210	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.