Gene detail

Detailed information of g645.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_009065681.1, hypothetical protein LOTGIDRAFT_222505 [Lottia gigantea]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q03154	Aminoacylase-1 OS=Homo sapiens OX=9606 GN=ACY1 PE=1 SV=1
Q99JW2	Aminoacylase-1 OS=Mus musculus OX=10090 GN=Acy1 PE=1 SV=1
Q6PTT0	Aminoacylase-1B OS=Rattus norvegicus OX=10116 GN=Acy1b PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000000 (this species only)
Orthogroup (gene family)	OG0000011 (this species only)
Orthogroup (gene family)	OG0000031 (this species only)
Orthogroup (gene family)	OG0000580 (this species only)
Orthogroup (gene family)	OG0001323 (this species only)
Orthogroup (gene family)	OG0001916 (this species only)
Orthogroup (gene family)	OG0002704 (this species only)
Orthogroup (gene family)	OG0003931 (this species only)
Orthogroup (gene family)	OG0008867 (this species only)
Orthogroup (gene family)	OG0019283 (this species only)
Orthogroup (gene family)	OG0048342 (this species only)
Orthogroup (gene family)	OG0059724 (this species only)
Orthogroup (gene family)	OG0080344 (this species only)
Orthogroup (gene family)	OG0171486 (this species only)
Orthogroup (gene family)	OG0171703 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19055 all species →	ABC2_membrane_7	ABC-2 type transporter	Family	Interproscan
PF00005 all species →	ABC_tran	ABC transporter	Domain	Interproscan
PF01039 all species →	Carboxyl_trans	Carboxyl transferase domain	Family	Interproscan
PF02140 all species →	Gal_Lectin	Galactose binding lectin domain	Domain	Interproscan
PF01400 all species →	Astacin	Astacin (Peptidase family M12A)	Domain	Interproscan
PF01602 all species →	Adaptin_N	Adaptin N terminal region	Repeat	Interproscan
PF06375 all species →	AP3D1	AP-3 complex subunit delta-1	Family	Interproscan
PF01546 all species →	Peptidase_M20	Peptidase family M20/M25/M40	Family	Interproscan
PF13650 all species →	Asp_protease_2	Aspartyl protease	Domain	Interproscan
PF05380 all species →	Peptidase_A17	Pao retrotransposon peptidase	Family	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF17921 all species →	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF03564 all species →	DUF1759	Protein of unknown function (DUF1759)	Family	Interproscan
PF00957 all species →	Synaptobrevin	Synaptobrevin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003439 all species →	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR050352 all species →	Family	ATP-binding cassette subfamily G transporters	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR043926 all species →	Domain	ABC transporter family G domain	Interproscan
IPR011762 all species →	Domain	Acetyl-coenzyme A carboxyltransferase, N-terminal	Interproscan
IPR034733 all species →	Domain	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	Interproscan
IPR029045 all species →	Homologous_superfamily	ClpP/crotonase-like domain superfamily	Interproscan
IPR011763 all species →	Domain	Acetyl-coenzyme A carboxyltransferase, C-terminal	Interproscan
IPR045190 all species →	Family	Methylcrotonoyl-CoA carboxylase beta chain MCCB/AccD1-like	Interproscan
IPR000922 all species →	Domain	D-galactoside/L-rhamnose binding SUEL lectin domain	Interproscan
IPR001506 all species →	Domain	Peptidase M12A	Interproscan
IPR024079 all species →	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR034035 all species →	Domain	Astacin-like metallopeptidase domain	Interproscan
IPR043159 all species →	Homologous_superfamily	D-galactoside/L-rhamnose binding SUEL lectin domain superfamily	Interproscan
IPR006026 all species →	Domain	Peptidase, metallopeptidase	Interproscan
IPR017105 all species →	Family	Adaptor protein complex AP-3, delta subunit	Interproscan
IPR010474 all species →	Domain	AP-3 complex subunit delta domain, metazoa	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR002553 all species →	Domain	Clathrin/coatomer adaptor, adaptin-like, N-terminal	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR052083 all species →	Family	Aminoacylase-1 peptidase M20A	Interproscan
IPR002933 all species →	Family	Peptidase M20	Interproscan
IPR001261 all species →	Conserved_site	ArgE/DapE/ACY1/CPG2/YscS, conserved site	Interproscan
IPR008042 all species →	Family	Retrotransposon, Pao	Interproscan
IPR001584 all species →	Domain	Integrase, catalytic core	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR041588 all species →	Domain	Integrase zinc-binding domain	Interproscan
IPR021109 all species →	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR001969 all species →	Active_site	Aspartic peptidase, active site	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR005312 all species →	Family	Protein of unknown function DUF1759	Interproscan
IPR001388 all species →	Family	Synaptobrevin-like	Interproscan
IPR042887 all species →	Family	Vesicle-associated membrane protein 4	Interproscan
IPR042855 all species →	Domain	v-SNARE, coiled-coil homology domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48041 all species →	ABC TRANSPORTER G FAMILY MEMBER 28	Interproscan
PTHR22855 all species →	ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED	Interproscan
PTHR10127 all species →	DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING	Interproscan
PTHR22781 all species →	DELTA ADAPTIN-RELATED	Interproscan
PTHR45892 all species →	AMINOACYLASE-1	Interproscan
PTHR22955 all species →	RETROTRANSPOSON	Interproscan
PTHR46897 all species →	VESICLE-ASSOCIATED MEMBRANE PROTEIN 4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0042626 all species →	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0140359 all species →	Molecular Function	ABC-type transporter activity	Interproscan
GO:0016874 all species →	Molecular Function	ligase activity	Interproscan
GO:0004485 all species →	Molecular Function	methylcrotonoyl-CoA carboxylase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0006552 all species →	Biological Process	L-leucine catabolic process	Interproscan
GO:1905202 all species →	Cellular Component	methylcrotonoyl-CoA carboxylase complex	Interproscan
GO:0030246 all species →	Molecular Function	carbohydrate binding	Interproscan
GO:0004222 all species →	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008237 all species →	Molecular Function	metallopeptidase activity	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0006623 all species →	Biological Process	protein targeting to vacuole	Interproscan
GO:0006896 all species →	Biological Process	Golgi to vacuole transport	Interproscan
GO:0010008 all species →	Cellular Component	endosome membrane	Interproscan
GO:0015031 all species →	Biological Process	protein transport	Interproscan
GO:0030123 all species →	Cellular Component	AP-3 adaptor complex	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0030117 all species →	Cellular Component	membrane coat	Interproscan
GO:0004046 all species →	Molecular Function	aminoacylase activity	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan
GO:0015074 all species →	Biological Process	DNA integration	Interproscan
GO:0004190 all species →	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0090161 all species →	Biological Process	Golgi ribbon formation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01969	MCCC2, accD1; 3-methylcrotonyl-CoA carboxylase beta subunit	EC:6.4.1.4	Valine, leucine and isoleucine degradation	ko00280	deepkoala
K08513	VAMP4; vesicle-associated membrane protein 4	-	Membrane trafficking	ko04131	deepkoala
K12396	AP3D; AP-3 complex subunit delta	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.