Gene detail

Detailed information of g6475.t1 in Montipora capitata

Genomic Location: Sc0000138:366761...375609
NR annotation: XP_044182651.1, uncharacterized protein LOC114969069 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

g6475.t1

atgagtggcagggaatcgtgttgcggtgggagcgtaccgccgccttgctgtgctgcgggcgcattcaaggtctccagcacaagatgtgatgcaaaccctataaagcttcaaattgacgcgcaacgttatttacctttcggcatccaagctggaagcgtcgtcgcaaacgtaaccgttacaaccagcgttaacttaatgcagccctttaggtattacattgacggagtcacgcaacgatgtccattatgctccgggcagcgacatcagtcacgcagcatcttgaaacgacgtcggcgtgacgaagacgatgacgatgacgacgatgacgatgataacaaagatgtatgcgagaatgcgggatctgtggagccgcaaaattatttttgcattaatcgatttagcggaagcattagaatagcgaatgattttgttttcatggatggggaagaatatgtactgtcggttcgtgtgacagatagtgataaccgtggtcgaactgagaacattgccagtgtgacatttatttctcgtgatatgtgcaatgagatacgaaggctctattaccaaactgttccagcttgtcgtaacgtttctggtgttctccgtggggaggccttccattgtccgagtattacctgtttacggcccttgtataactggcaaatggctttaaccaggtcaagtgaagcactacgaaagagttgttctttcgatccacaaagtatgttggctttgaagcagaagtattggagttgtcttggacccccaaggataacgttacaaccagtctccttgaggttgacgaagggcgcggcagccgtgctaacatgtaatgctagcagtccactacctgtacatgtcacgtggtacaagaatggaaaagtttccggatttggaaaccaacttgagattaacaactttgaaaacgaagatcaaggcgactattattgcaagttctcgacagatctgacaagtagtttctctgaaacagcgttacttgttactgaaggtgtatttacgtcaatagtatcattcacaatcgcaaatgaaaactatcagggtgaccttctggactcgagcagctcgaggtacaaagatttccaggacatcatacaacgaaatctggaaatttatttcaacaaagtaaacccatcaggaagctatcaggtcaagatgacgaagttgagggactcatttggcaaagttggcttagatctggtagtttacagctcagcacagaatgaagatatgacgtcgtactacaagagactccagacgcaactgactgacagcggagagatggaagagtttattaaaccttttaaagtgtcacgcaagatcgtggtgataaaaagtgctacccactgtgtgactcaagaaactggaaaaatatccattaaggggtacatgacgtggcagataactcctattggccaaaactcttcatccgtaaaatgcccgtatggtcctcctgccgccagtgccacacgcttttgtggagggaatttctctgctggtggtttgtgggaaaacccagatgctagcggttgcaaatacaagtcagagagaaccaacagactagacaaactctctaagattcgtatcaggaagcaaaacgttgtcaagattaccaaagaggtaaaagttttgacgtcacagccagacgacatgaacgaggctgatgcagtattgatagctgatgtcataaccgatatcgtctcattggaagattcattaaatgagactgcgcaagatgtcatgaccgttgttgacaacgttttgaatatgaagaaggaagatttgaaagagagtcaacgatcgaaaagcgcttctaccaagttcgttcaggcggtagacaaattagccacgaaccttcctctatcaacaaacgaatcgtccagggttctagtcacttcaagtgtagccatccaatcaagacgagcagacccagactcctttccaggcatgacgcttgcaatcaaacaacctgcagcggaccctgaaaatttaacgccgaatagcatggcgatcgacgaaattccgatggacgatgttcagacatcaatcactttgccggaagtcatgtttgagggcaaggatcctatcggcaaatcggtcaagattggttttgtcgtttatcagaatgacaagtttttccaaccagttgtaccggttaatgtcgagagcaagcgagaggcctcttcatttatgagtcggattatgtccagcagtgttcgggatatgacgttcgacaaccttttaaaaccagttgagcttgttttcgagcctgcacagaaaatggacgagaatggcatgaaggctgtgtgtgtcttttgggatttcgatgctattggtaagaattga

Transcript

g6475.t1

ATGAGTGGCAGGGAATCGTGTTGCGGTGGGAGCGTACCGCCGCCTTGCTGTGCTGCGGGCGCATTCAAGGTCTCCAGCACAAGATGTGATGCAAACCCTATAAAGCTTCAAATTGACGCGCAACGTTATTTACCTTTCGGCATCCAAGCTGGAAGCGTCGTCGCAAACGTAACCGTTACAACCAGCGTTAACTTAATGCAGCCCTTTAGGTATTACATTGACGGAGTCACGCAACGATGTCCATTATGCTCCGGGCAGCGACATCAGTCACGCAGCATCTTGAAACGACGTCGGCGTGACGaagacgatgacgatgacgacgatgacgatgataacAAAGATGTATGCGAGAATGCGGGATCTGTGGAGCCGCAAAATTATTTTTGCATTAATCGATTTAGCGGAAGCATTAGAATAGCgaatgattttgttttcatggATGGGGAAGAATATGTACTGTCGGTTCGTGTGACAGATAGTGATAACCGTGGTCGAACTGAGAACATTGCCAGTGTGACATTTATTTCTCGTGATATGTGCAATGAGATACGAAGGCTCTATTACCAAACTGTTCCAGCTTGTCGTAACGTTTCTGGTGTTCTCCGTGGGGAGGCCTTCCATTGTCCGAGTATTACCTGTTTACGGCCCTTGTATAACTGGCAAATGGCTTTAACCAGGTCAAGTGAAGCACTACGAAAGAGTTGTTCTTTCGATCCACAAAGTATGTTGGCTTTGAAGCAGAAGTATTGGAGTTGTCTTGGACCCCCAAGGATAACGTTACAACCAGTCTCCTTGAGGTTGACGAAGGGCGCGGCAGCCGTGCTAACATGTAATGCTAGCAGTCCACTACCTGTACATGTCACGTGGTACAAGAATGGAAAAGTTTCCGGATTTGGAAACCAACTTGAGATTAACAACTTTGAAAACGAAGATCAAGGCGACTATTATTGCAAGTTCTCGACAGATCTGACAAGTAGTTTCTCTGAAACAGCGTTACTTGTTACTGAAGGTGTATTTACGTCAATAGTATCATTCACAATCGCAAATGAAAACTATCAGGGTGACCTTCTGGACTCGAGCAGCTCGAGGTACAAAGATTTCCAGGACATCATACAACGAAATCTGGAAATTTATTTCAACAAAGTAAACCCATCAGGAAGCTATCAGGTCAAGATGACGAAGTTGAGGGACTCATTTGGCAAAGTTGGCTTAGATCTGGTAGTTTACAGCTCAGCACAGAATGAAGATATGACGTCGTACTACAAGAGACTCCAGACGCAACTGACTGACAGCGgagagatggaagagtttattaAACCTTTTAAAGTGTCACGCAAGATCGTGGTGATAAAAAGTGCTACCCACTGTGTGACTCAAGAAACTGGAAAAATATCCATTAAGGGGTACATGACGTGGCAGATAACTCCTATTGGCCAAAACTCTTCATCCGTAAAATGCCCGTATGGTCCTCCTGCCGCCAGTGCCACACGCTTTTGTGGAGGGAATTTCTCTGCTGGTGGTTTGTGGGAAAACCCAGATGCTAGCGGTTGCAAATACAAGTCAGAGAGAACCAACAGACTAGACAAACTCTCTAAGATTCGTATCAGGAAGCAAAACGTTGTCAAGATTACCAAAGAGGTAAAAGTTTTGACGTCACAGCCAGACGACATGAACGAGGCTGATGCAGTATTGATAGCTGATGTCATAACCGATATCGTCTCATTGGAAGATTCATTAAATGAGACTGCGCAAGATGTCATGACCGTTGTTGACAACGTTTTGAATATGAagaaggaagatttgaaagagAGTCAACGATCGAAAAGCGCTTCTACCAAgttCGTTCAGGCGGTAGACAAATTAGCCACGAACCTTCCTCTATCAACAAACGAATCGTCCAGGGTTCTAGTCACTTCAAGTGTAGCCATCCAATCAAGACGAGCAGACCCAGACTCCTTTCCAGGCATGACGCTTGCAATCAAACAACCTGCAGCGGACCCTGAAAATTTAACGCCGAATAGCATGGCGATCGACGAAATTCCGATGGACGATGTTCAGACATCAATCACTTTGCCGGAAGTCATGTTTGAGGGCAAGGATCCTATCGGCAAATCGGTCAAGATTGGTTTTGTCGTTTATCAGAATGACAAGTTTTTCCAACCAGTTGTACCGGTTAATGTCGAGAGCAAGCGAGAGGCCTCTTCATTTATGAGTCGGATTATGTCCAGCAGTGTTCGGGATATGACGTTCGACaaccttttaaaaccagttgaGCTTGTTTTCGAGCCTGCACAGAAAATGGACGAGAATGGCATGAAGGCTGTGTGTGTCTTTTGGGATTTCGATGCTATTGGTaagaattga

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR036364	Homologous_superfamily	SEA domain superfamily	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR046338	Homologous_superfamily	GAIN domain superfamily	Interproscan
IPR051963	Family	Adhesion G protein-coupled receptor A	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR000082	Domain	SEA domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45930	G-PROTEIN COUPLED RECEPTOR 124-LIKE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007166	Biological Process	cell surface receptor signaling pathway	Interproscan