Detailed information of g654.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KAJ7383927.1, DDB1- and CUL4-associated factor 6 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5R9B8DDB1- and CUL4-associated factor 6 OS=Pongo abelii OX=9601 GN=DCAF6 PE=2 SV=2
Q58WW2DDB1- and CUL4-associated factor 6 OS=Homo sapiens OX=9606 GN=DCAF6 PE=1 SV=1
Q9DC22DDB1- and CUL4-associated factor 6 OS=Mus musculus OX=10090 GN=Dcaf6 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13502AsmA_2AsmA-like C-terminal regionFamilyInterproscan
PF06462Hyd_WAPropellerRepeatInterproscan
PF19193TectoninTectonin domainRepeatInterproscan
PF00431CUBCUB domainDomainInterproscan
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF16455UBDUbiquitin-binding domainDomainInterproscan
PF21132MFD_D3MFD, D3 domainDomainInterproscan
PF02559CarD_TRCF_RIDCarD-like/TRCF RID domainDomainInterproscan
PF17757UvrB_interUvrB interaction domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00291PALPPyridoxal-phosphate dependent enzymeFamilyInterproscan
PF00595PDZPDZ domainDomainInterproscan
PF02854MIF4GMIF4G domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032712DomainAsmA-like, C-terminalInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR050841FamilyDevelopmental metalloproteases and endocytic receptorsInterproscan
IPR000859DomainCUB domainInterproscan
IPR006624RepeatBeta-propeller repeat TECPRInterproscan
IPR009091Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR038169Homologous_superfamilyDC-UbP/UBTD2, N-terminal domain superfamilyInterproscan
IPR039869FamilyUbiquitin domain-containing protein 1/2Interproscan
IPR032752DomainDC-UbP/UBTD2, N-terminal domainInterproscan
IPR003711DomainCarD-like/TRCF, RNAP-interacting domainInterproscan
IPR036101Homologous_superfamilyCarD-like/TRCF, RNAP-interacting domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR004807FamilyUvrABC system, subunit BInterproscan
IPR048635DomainTranscription-repair-coupling factor, D3 domainInterproscan
IPR041471DomainUvrB, interaction domainInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR045151FamilyDDB1- and CUL4-associated factor 8-likeInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR051166FamilyThreonine SynthaseInterproscan
IPR036052Homologous_superfamilyTryptophan synthase beta chain-like, PALP domain superfamilyInterproscan
IPR001926DomainTryptophan synthase beta chain-like, PALP domainInterproscan
IPR004450FamilyThreonine synthase-likeInterproscan
IPR000634Binding_siteSerine/threonine dehydratase, pyridoxal-phosphate-binding siteInterproscan
IPR001478DomainPDZ domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR051067FamilyNa+/H+ exchange regulatory cofactorInterproscan
IPR036871Homologous_superfamilyPX domain superfamilyInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR050327FamilyProton-linked Monocarboxylate TransporterInterproscan
IPR003890DomainMIF4G-like, type 3Interproscan
IPR045208FamilyInitiation factor 4GInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47501TRANSPOSASE-RELATEDInterproscan
PTHR24251OVOCHYMASE-RELATEDInterproscan
PTHR13609UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATEDInterproscan
PTHR24029UVRABC SYSTEM PROTEIN BInterproscan
PTHR15574WD REPEAT DOMAIN-CONTAINING FAMILYInterproscan
PTHR42690THREONINE SYNTHASE FAMILY MEMBERInterproscan
PTHR14191PDZ DOMAIN CONTAINING PROTEINInterproscan
PTHR11360MONOCARBOXYLATE TRANSPORTERInterproscan
PTHR23253EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0009380Cellular Componentexcinuclease repair complexInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0030374Molecular Functionnuclear receptor coactivator activityInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0080008Cellular ComponentCul4-RING E3 ubiquitin ligase complexInterproscan
GO:0006520Biological Processamino acid metabolic processInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0016324Cellular Componentapical plasma membraneInterproscan
GO:0043495Molecular Functionprotein-membrane adaptor activityInterproscan
GO:0072659Biological Processprotein localization to plasma membraneInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0016281Cellular Componenteukaryotic translation initiation factor 4F complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01733thrC; threonine synthaseEC:4.2.3.1
Ubiquitin systemko04121deepkoala
Vitamin B6 metabolismko00750deepkoala

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